KEGG   Streptomyces collinus: B446_26190Help
Entry
B446_26190        CDS       T02787                                 

Definition
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sci  Streptomyces collinus
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:sci00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    B446_26190
Enzymes [BR:sci01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     B446_26190
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     B446_26190
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
6029769..6030629
Genome map
AA seq 286 aa AA seqDB search
MPELPEVEVVRRGLERWVAHRTVADVEVLHPRAVRRHVAGADDFAHRLKGHHIGTPSRRG
KYLWLPLEETNQSVLAHLGMSGQLLVQQHQAPDEKHLRIRVRFADGLGTELRFVDQRTFG
GLSLHDNTPDGLPDVIAHIARDPLDPLFDDEAFAVALRRKRTTVKRALLDQSLISGVGNI
YADEALWRARIHYERPTANLTRPVTAELLGHVRDVMNAALAVGGTSFDSLYVNVNGESGY
FDRSLDAYGREGLPCRRCGTPMRRRPWMNRSSYFCPKCQRPPRVPS
NT seq 861 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagttgcccgaggtcgaggtcgtccggcgcggcctggagcggtgggtcgcccac
cgcacggtcgcggacgtcgaggtgctgcacccgcgcgcggtgcgccggcacgtcgccggc
gccgacgacttcgcgcaccgtctcaagggtcaccacatcggcacgcccagccggcgcggc
aagtacctgtggctgccgctggaggagaccaaccagtccgtcctggcccacctgggcatg
agcggccagctgctggtgcagcagcaccaggcgccggacgagaagcacctgcgcatccgg
gtccggttcgccgacggcctcggcaccgagctgcgcttcgtggaccagcgcaccttcggc
ggcctgtcgctgcacgacaacacccccgacggcctgcccgacgtcatcgcgcacatcgcc
cgcgaccccctggacccgctgttcgacgacgaggcgttcgccgtcgcgctgcgccgcaag
cggaccaccgtcaagcgggccctgctcgaccagtcgctgatcagcggggtcggcaacatc
tacgcggacgaggcgctgtggcgcgcgcgcatccactacgaacgcccgacggcgaacctc
acccgcccggtcacggccgaactgctcggacacgtccgggacgtgatgaacgcggcgctg
gccgtcggcggcaccagcttcgacagcctgtacgtcaacgtcaacggggagtcgggctac
ttcgaccggtccctggacgcgtacgggcgtgagggactgccgtgcaggcggtgcggtacg
ccgatgcggcgccggccgtggatgaaccggtccagctacttctgcccgaagtgtcagagg
ccgccgcgcgtcccgtcgtaa

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