KEGG   Sorangium cellulosum So ce 56: sce7131Help
Entry
sce7131           CDS       T00634                                 

Gene name
fpgX
Definition
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
scl  Sorangium cellulosum So ce 56
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:scl00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    sce7131 (fpgX)
Enzymes [BR:scl01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     sce7131 (fpgX)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     sce7131 (fpgX)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(9943648..9944520)
Genome map
AA seq 290 aa AA seqDB search
MPERPDLEYVVPILARELAGAAVAAARAENSVVLHVLLPERLDALLPGAEIRRVARRAHA
VVFELDGARALDLVISPMLAGRFSITRPGETRIPTDLAFSLTLGDGRELRVRDDVQMSKV
YVLARGDFDRLPGLQRVGLDVLDPRVFTQEAFRSAARGRRDLAKDFLMDGTALDSMGDSY
ADEVLFEARIHPKATVQSLSEEETDRLHAAIARVLGDATRTIARRAPALDERLRDFLKVR
GRPGQPCPRCGDKLRRASVHGHDAIFCPACQPEARRSAAGDPRRARREPG
NT seq 873 nt NT seq  +upstreamnt  +downstreamnt
gtgcccgagcgcccggacctggagtacgtcgttccgatcctcgcgcgcgagctcgcgggc
gcggccgtggccgcggcgcgcgccgagaactcggtggtgctgcacgtcctgctcccggag
cgcctcgacgcgctcttgccgggcgcggagatccggcgcgtggcgcggcgggcgcacgcc
gtggtcttcgagctcgacggggcgcgcgcgctcgatctcgtgatctccccgatgctggca
gggcggttctcgatcacgcggccaggagagacgcggattccaaccgatctcgccttctcg
ctgaccctcggggacggccgcgagctcagggtccgagacgacgtgcagatgagcaaggtc
tacgtgctcgcgcggggcgatttcgacaggctccccgggctccagcgcgtcggcctcgac
gtcctcgatcctcgggtgttcacgcaggaggcgtttcgctccgcggcgcgcgggcggcgc
gacctcgccaaggatttcctgatggacgggacggcgctcgactccatgggagactcgtac
gccgacgaggtgctcttcgaggcaaggatccacccgaaggcgacggtccagagcctctcc
gaggaggagaccgaccgcctgcacgcggcgatcgcccgtgtcctcggcgacgcgacccgg
acgatcgcccggcgcgcgccggcgctggacgagcggctgcgcgacttcctcaaggtccgc
gggcgtccgggccagccgtgcccgcgctgcggcgacaagctccgtcgcgcgagcgtccac
gggcacgacgcgatcttctgcccggcctgtcagccggaggcgcggcggagcgcagcgggg
gatccgcgccgcgctaggcgggagccgggctga

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