KEGG   Sorangium cellulosum So ce56: sce7932
Entry
sce7932           CDS       T00634                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
scl  Sorangium cellulosum So ce56
Pathway
scl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:scl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    sce7932
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scl03021]
    sce7932
   03019 Messenger RNA biogenesis [BR:scl03019]
    sce7932
Transcription machinery [BR:scl03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     sce7932
Messenger RNA biogenesis [BR:scl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     sce7932
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT Spore_III_AA OB_RNB AAA_22 ATPase_2 AAA AAA_14 AAA_16
Other DBs
NCBI-ProteinID: CAN98102
UniProt: A9FGA5
Position
complement(11058705..11059952)
AA seq 415 aa
MHLRELKQKPMAELVQMAKGLNIEGAAGLRKQEVIFALLQAHAAQDQPVYGEGVLECLPD
GFGFLRAPDYNYLPGPDDIYVSPSQIRRFNLRTGDSVSGSIRPPKEREAYFALLKVDKIN
GEPPEVARDKILFDNLTPLYPQQKFNIENGTKSFSTRIIDMLCPIGKGQRCLIVSPPRAG
KTVLLQQIANAISANHPDTTLIVLLIDERPEEVTDMQRTVKGEVISSTFDEPPTRHVQVA
EMVIEKAKRLVEHKHDVVILLDSITRLARAYNTVVPPSGKILSGGVDSNALHKPKRFFGA
ARNVEEGGSLTIVATALVDTGSRMDEVIFEEFKGTGNSEIHLDRKLMEKRIFPCLDINKS
ATRKEELLLPEWILQRVWLLRQLLHPLNVIDSMEFLLDKVSRTETNQEFLESMNQ
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgcacctcagggaactgaagcagaaaccgatggccgagctcgtccagatggcgaagggg
ctcaacatcgagggcgctgccgggctgcgcaagcaggaggtcatcttcgctctcctgcag
gcccacgcggcgcaggaccagccggtctacggcgagggcgtgctcgaatgcctgcccgac
ggcttcggcttcctccgggcgccggactacaactacctgccgggtccggacgacatctac
gtctcgccgtcccagatccggcgcttcaacctccgcaccggcgacagcgtgagcggctcc
atccggccgcccaaggagcgcgaggcgtacttcgcgctgctcaaggtcgacaagatcaac
ggcgagccccccgaggtcgcccgcgacaagatcctgttcgacaacctcacgcccctctac
ccgcagcagaagttcaacatcgagaacgggacgaagagcttctcgacccgcatcatcgac
atgctctgccccatcgggaaggggcagcgctgcctcatcgtctcgccgccccgcgcgggc
aagacggtgctgctccagcagatcgccaacgcgatctccgcgaaccacccggacacgacg
ctgatcgtgctgctcatcgacgagcgcccggaggaggtgaccgacatgcagcgcaccgtg
aagggcgaggtgatcagctcgaccttcgacgagcccccgacgcggcacgtgcaggtcgcc
gagatggtgatcgagaaggcgaagcgccttgtcgagcacaagcacgacgtcgtgatcttg
ctggactcgatcacccgcctggcgcgcgcgtacaacacggtcgtcccgccgagcggcaag
atcctctccggcggcgtcgactcgaacgcgctgcacaagccgaagcggttcttcggcgcc
gcgcgcaacgtcgaggagggcggctcgctgacgatcgtcgccaccgcgctcgtcgacacg
ggctcgcgcatggacgaggtcatcttcgaggagttcaagggcacgggtaacagcgagatc
cacctggatcgcaagctgatggagaagcggatcttcccctgcctcgacatcaacaagagc
gcgacccgcaaggaagagctgctgctgccggagtggatcctccagcgcgtgtggctgctc
cgccagctgctgcaccccctcaacgtcatcgactcgatggaattcctcctggacaaggtg
agccgcaccgagaccaatcaggaattcctcgagagcatgaaccagtaa

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