KEGG   Streptomyces clavuligerus: BB341_10080
Entry
BB341_10080       CDS       T04717                                 
Name
(GenBank) ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
sclf  Streptomyces clavuligerus
Pathway
sclf03420  Nucleotide excision repair
sclf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sclf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BB341_10080
   03430 Mismatch repair
    BB341_10080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sclf03400]
    BB341_10080
Enzymes [BR:sclf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BB341_10080
DNA repair and recombination proteins [BR:sclf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BB341_10080
   MMR (mismatch excision repair)
    Other MMR factors
     BB341_10080
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_11 AAA_12 AAA_30 ResIII DEAD DNA_gyraseA_C
Other DBs
NCBI-ProteinID: ANW18553
UniProt: B5GYX4
Position
complement(2566938..2569415)
AA seq 825 aa
MSSLFDDHFLASLQSTPEDPPPPEDHEDSEAHAPEEIPDDLFQGAFDMPPARDAYHRDGA
PRTVIDPASLLEGLNEQQRAAVVHAGSPLLIVAGAGSGKTRVLTHRIAHLLATRGVHPGQ
ILAITFTNKAAGEMKERVEQLVGPRAQAMWVLTFHSACVRILRRESKKLGFTSSFSIYDA
ADSKRLMALVCRDLDLDPKKFPPKSFSAKISNLKNELIDEESFADSAADGFEKTLAQAYR
MYQARLREANALDFDDIIMTTVHMLQAFPDVAEHYRRRFRHVLVDEYQDTNHAQYTLVRE
LVGPGYEDLPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPEATTVMLEQNYRSSQTI
LSAANAVIERNESRRPKNLWTNAGDGAQIIGYVADTEHDEAQFVADEIDRLTDASEVKAG
DVAVFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERREVRDVLAYLRVLANPEDSVPLR
RILNVPKRGIGERAEAMIDALSLREKITFPQALIRVDEAYGMAARSANAVKRFNVLMGEL
RTIVDSGAGPAVVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEFEQARAEGE
GEGGAGTLAEFLEQVALVADSDQIPDEDEDGSGVITLMTLHTAKGLEFPVVFLSGMEDGV
FPHMRALSQKKELEEERRLAYVGITRARERLYLTRSTMRSAWGQPAYNPPSRFLEEIPVR
HLEWRRTGPSAAPAGPVAGFGSRLPSAPSSRSRAGGAAGFATGRGGAGKPVISLSTGDRV
THDQFGLGTVVEVTGAGTDGAVATVDFGDPKPKRLLLKYAPVEKL
NT seq 2478 nt   +upstreamnt  +downstreamnt
atgagcagcctctttgacgatcacttcctggcgagcctccagtccaccccggaggacccc
ccgccgcccgaggaccacgaggactcggaggcacacgcccctgaggagatcccggacgat
ctcttccagggcgccttcgacatgcccccggccagagacgcgtaccaccgtgacggcgcc
ccgcgcacggtgatcgaccccgcgtccctcctcgaagggctcaacgaacagcagcgcgcg
gccgtggtccacgccggttccccgctgctcatcgtcgccggagcgggctcgggcaagacc
cgggtcctgacccatcggatcgcccatctgctggcgacccgcggtgtccaccccggccag
atcctggcgatcaccttcaccaacaaggccgccggtgagatgaaggagcgcgtggagcag
ctcgtcggcccgcgcgcccaggcgatgtgggtgttgacgttccacagcgcctgtgtgcgg
attctgcgccgcgagtccaagaagctgggcttcacctcgtcgttctcgatctacgacgcc
gccgactccaagcggctgatggcgctggtctgccgcgatctcgatctggacccgaagaag
ttcccgccgaagtcgttcagcgcgaagatctcgaacctgaagaacgagctgatcgacgag
gagagcttcgccgacagcgccgcggacgggttcgagaagacgctcgcccaggcgtaccgg
atgtaccaggcgcggctgcgcgaggccaacgccctggacttcgacgacatcatcatgacg
accgtccatatgctccaggcgttcccggatgtcgccgagcactaccggcggcgtttccgt
catgtcctcgtcgacgagtaccaggacaccaaccacgcccagtacaccctcgtgcgcgag
ctggtcggaccggggtacgaggatctgccgcccgccgagctgtgtgtcgtcggtgacgcc
gaccagtcgatctatgccttccggggcgcgacgatccgcaacatcctccagttcgaggag
gactacccggaggcgacgaccgtcatgctggagcagaactaccgctccagccagacgatc
ctctccgccgccaacgccgtcatcgagcgcaacgagagccgccgtcccaagaatctgtgg
accaacgcgggcgacggcgcgcagatcatcggctatgtcgccgacaccgagcacgacgag
gcgcagttcgtcgcggacgagatcgaccggctgacggacgcgagcgaggtgaaggcgggc
gatgtcgccgtcttctaccgcaccaacgcccagtcccgggtcttcgaggagatcttcatc
cgggtgggcctgccgtacaaggtcgtcggcggtgtgcgcttctacgagcgcagggaggtc
cgggacgtcctcgcctatctgcgggtcctcgccaacccggaggacagcgttccgctgcgg
cggattctcaatgtccccaagcggggcatcggggagcgcgcggaggcgatgatcgacgcg
ctctccctgcgcgagaagatcaccttcccgcaggcgctgatccgggtggacgaggcgtac
ggcatggccgcgcgctcggccaacgccgtcaagcgcttcaacgtgctgatgggggagttg
cgcacgatcgtcgactccggtgccggtcccgccgtggtgctggaggccgtgctggagcgg
acgggctatctcgcggaactccaggcgtcgacggacccccaggacgagactcgtatcgag
aaccttcaggagctggcggcggtcgcgctggagttcgagcaggcccgcgccgagggcgag
ggcgagggcggcgccgggacgctggcggagttcctggagcaggtcgccctcgtcgccgac
tcggaccagatccccgacgaggacgaggacggctccggtgtcatcacactgatgaccctg
cacacggccaaggggctggagttccccgtggtgttcctgagcggtatggaggacggcgtc
ttcccgcatatgcgggccctctcccagaagaaggaactggaggaggagcggcggctggcg
tatgtgggcatcacccgggcccgcgagcggctctatctgacccgttcgaccatgcggagc
gcctggggacagcccgcgtacaaccctccgtcgcgcttcctggaggagatccccgtccgc
catctggagtggcggcgtacgggaccgtcggccgcgcccgccgggccggtggccggattc
gggtcccggttgccctcggctccgtcctcccgctcccgggcgggcggcgccgcggggttc
gccaccggacggggcggcgcgggcaagcccgtgatctccctgtcgaccggggaccgggtc
acgcacgaccagttcggtctgggcaccgtggtggaggtcaccggcgccgggacggacggc
gcggtggcgacggtcgacttcggggaccccaagcccaagcggctgctgctgaagtacgcg
ccggtggagaagctctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (22)   

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