KEGG T01331: SCHCODRAFT

Schizophyllum commune: SCHCODRAFT_50382

Entry

SCHCODRAFT_50382 CDS T01331

Definition

hypothetical protein

Orthology

K07466

replication factor A1

Organism

scm Schizophyllum commune

Pathway

scm03030	DNA replication
scm03420	Nucleotide excision repair
scm03430	Mismatch repair
scm03440	Homologous recombination

Module

scm_M00288

RPA complex

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:scm03030]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:scm03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:scm03430]
Genetic Information Processing; Replication and repair; Homologous recombination [PATH:scm03440]

SSDB

Motif

Pfam:

Rep_fac-A_C tRNA_anti-codon Rep-A_N DUF223

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

Unknown

AA seq 628 aa
MSVGLLTEGAIMRLATCDDDDDLFNSGVVLQALSVKSINEGKEGKQGEKPAPKSGQPERL
RIILSDGEWFMQAMLATQLNDVGIEKNSIVRISRASRNIVQNRRLVIVLGLEIVQHCDEK
LRRDPNDEKQPYTLPSEYLKVKPDGENGQSPAPQSKPAAAPSTSTVPRTATPQLPAQPHR
DSKNTAPNGRSIYPIEGLSPYQNNWTIKARVTQKSDIRRWSNQRGEGRLFNVTLMDDTGE
IRATGFNQAVDELYDKFEEGKVYYVSKARVNLAKKKFSNVNNDYELSLERSTEVEPCLEA
ADVPTIKYNFVKLDALQEVPKDSNCDVIGVVKEVGELSEITTKTTNRTMKKRELTLVDDT
GYSVRVTLWGNTAEKYEEEGHPVIAFKGVKVGDFGGRSLSMLMSSMMFVNPDTTEAFHLR
GWFDDDGKTLQFSSHTSGGGAGTGRGFDRDDQRTLMEIKNANLGMGDQPDYFSSRATIMH
IKDNNFAYPACRSPDCNKKVVENGPGEWRCEKCNVSHSSPDYRFMLQLAVADLHGQAWFQ
GFNDAGQVIFNRSANEIMQMKSGDDDGFLRAFAQANYQAFNFNCRAKADTWNDETRVRYG
ITKVEPVDFVKEAQYMRDKLQSEWGAEI

NT seq 1887 nt +upstreamnt +downstreamnt
atgtcagtaggtttgctcaccgagggcgctattatgaggctcgctacttgtgacgacgat
gacgacctcttcaactccggtgtcgttctgcaagccctgtcggtcaaaagcatcaacgag
ggcaaggaaggcaagcagggggaaaagcctgcacccaagtcgggtcagcctgagcgcctt
cgcattatcctgtcggacggcgaatggttcatgcaagccatgcttgccacgcagctgaac
gatgtcggaatcgagaagaactcgatcgtgcgtatatcacgcgcgtcgcgtaatatagtg
cagaacaggaggcttgtcattgttcttggcctggaaatagtccagcattgcgacgagaag
ctgaggagggatcccaatgatgagaaacaaccgtataccctaccgtccgagtatctcaaa
gtcaagccggacggagagaacggccagtcaccagcccctcaatcgaagcccgccgcggcg
cctagcacatctaccgtcccccgcactgcgacacctcagctgcccgctcagccccaccgc
gacagcaagaacacggcgcctaacggtcgatccatctaccccatcgagggtcttagcccc
taccagaacaactggacgatcaaggcgcgtgttacgcagaagtccgacatccgcaggtgg
tcgaaccagcgcggagagggccgcttgttcaatgtcaccttgatggacgacacgggcgag
atccgcgccaccggtttcaatcaggctgtggacgagttatacgataagttcgaggagggg
aaggtgtactatgtatcgaaggcacgcgtcaacctcgccaagaagaagttctcgaacgtc
aacaacgactatgagcttagtctggagcgtagcacggaggtcgagccttgcttggaggct
gccgatgtgccgactatcaagtacaacttcgtcaagcttgacgctctgcaagaggtcccc
aaggattccaactgtgatgttattggcgtcgtgaaggaggtcggcgagctgtccgagatc
acgacgaagacgaccaaccgtacgatgaagaagcgcgaactaacgctggtcgacgacacc
ggctactccgtccgcgtcaccctctggggcaacaccgccgaaaagtacgaggaggaagga
caccccgtcatcgctttcaagggcgtcaaagtcggcgatttcggcggccgctccctctcc
atgctcatgtcgtccatgatgttcgtcaacccggacaccaccgaggccttccacctccgc
ggctggttcgacgacgatggcaagacgctgcagttttcgtcgcacacgagcggcggtggc
gcgggtaccgggcgcggctttgaccgcgacgaccagcgcacgttgatggagatcaagaat
gcgaatctggggatgggcgaccagccggactacttctcgtcgagggcgaccatcatgcac
atcaaggacaataactttgcgtatccggcatgcaggagcccagactgcaacaagaaggtc
gtagagaatgggcccggtgaatggcgctgcgagaagtgcaacgtgtcgcattcgtcgcca
gactatcgctttatgctgcagctcgccgtcgcggatctgcacggccaagcatggttccag
ggcttcaacgatgccggtcaggtcatcttcaataggtcggcgaacgagatcatgcagatg
aagtcgggcgatgacgacggcttcctccgcgccttcgcacaagcgaactatcaagccttc
aacttcaactgccgcgcaaaggccgacacatggaacgacgagactcgcgttcggtacggc
atcacgaaggttgagcctgtggactttgtgaaggaggcgcaatacatgcgcgacaagctg
cagtcggagtggggtgcggagatctaa

All links

Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SCM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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