KEGG   Solitalea canadensis: Solca_1085Help
Entry
Solca_1085        CDS       T02084                                 

Definition
ATP-dependent DNA ligase
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
scn  Solitalea canadensis
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:scn00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Solca_1085
   03420 Nucleotide excision repair
    Solca_1085
   03430 Mismatch repair
    Solca_1085
   03450 Non-homologous end-joining
    Solca_1085
Enzymes [BR:scn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Solca_1085
DNA repair and recombination proteins [BR:scn03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Solca_1085
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1292674..1294269
Genome map
AA seq 531 aa AA seqDB search
MKLFTNLFLQLDRTNKTNEKVALLKAYFLIAPDKDKLWALALFTGRRPPRKVKTTQVQHW
AMQQAGIPEWLFRESYNSVGDLAETISLILPESASVATKTMSEWFDYLSKLNSASDEEKE
KLITDAWKQLGTFETFVFNKLLMGSFRIGVSQTLVIRAIAEAFEIEPAVVAHRIMGQWNA
FETSFEGLIHAENSADELSKPYPFYLAYAIESDIENLGAVEEWFAEWKWDGIRSQLIYRN
NELYIWSRGEDLMTDKFPELHVLKDYLPANVVIDGELVCFANDKPLPFNLLQTRIGRKNL
TKKILTEAPVVILAYDLLEYEGNDIRDKPHAERRALLETVVQQVNMPYLLRLSPLVNFNE
WNELKLLHLQSRELAAEGFMLKRRSATYQVGRKKGDWWKWKVDPLSVDAVLVYAQKGHGR
RAELYTDYTFAVWDEEGKLIPFAKAYSGLTDEEIKIVDRFIRQNTLEKFGPVRTVTPELV
FEIGFEGINASSRHKSGIAVRFPRILNWRKDKPVEEADTLENLRNMLYQFK
NT seq 1596 nt NT seq  +upstreamnt  +downstreamnt
atgaaattatttaccaacctgtttcttcagcttgatcgtaccaataaaacgaatgaaaaa
gtagccttgcttaaggcttatttcctgatagcccctgataaagataaattatgggcattg
gcactatttactggtcgtcgtccgccgcgaaaagttaaaactacgcaggttcagcactgg
gccatgcaacaggcaggtattcctgagtggctatttcgtgaaagttataatagtgttggt
gatttggctgaaaccatttcattgattttacccgaatcagcatctgttgcaactaaaacc
atgagcgaatggtttgattatctgtcgaaattaaactcagcatcagacgaagaaaaggaa
aaattgattacagatgcatggaaacaacttggaacttttgaaacctttgttttcaataaa
ttgctgatgggtagttttcggattggcgtttcacaaactttggttattagggctatagcc
gaagcttttgaaatagagcctgccgttgttgctcatcgcattatgggacaatggaatgct
tttgaaacttcatttgaagggcttattcatgctgaaaatagtgcagatgaattatccaag
ccgtatcctttctatttggcttatgctatcgaaagtgatattgaaaatttgggtgctgtc
gaagaatggtttgccgaatggaaatgggatggtattcgctcgcaattaatctaccgaaat
aatgaattgtacatctggtcgagaggggaagatctgatgaccgacaagtttcctgagttg
catgtgttaaaggattatcttccggcaaacgtagttattgatggcgaattggtttgtttt
gctaatgacaaaccactgccctttaatctgcttcaaacacgaattgggcgtaaaaaccta
acaaagaaaatactgacggaggctcctgttgtaatattggcttatgaccttttggagtac
gaggggaatgatattcgggataaacctcatgcagaacgtcgtgcattacttgaaactgta
gttcagcaagtaaacatgccttatttattacgattatcgcctttagttaatttcaatgaa
tggaatgagctaaagctgttgcacctacaatcgcgggaattggctgcggaaggctttatg
ttaaaaagaaggagtgcaacttatcaggttggtcgtaaaaaaggcgactggtggaagtgg
aaagttgatccattaagtgttgacgcagtattggtgtatgcccaaaaagggcatggaaga
agggccgagctatatacagattatacatttgctgtttgggatgaagaagggaaattaatt
ccatttgcaaaagcttattccggattaacggatgaagaaataaaaatagtcgatcgtttt
atcaggcaaaatacacttgagaaatttggtcctgttagaaccgtaacacctgaattggtt
tttgaaattggttttgagggtataaatgcttcgagccgacataaatcaggtattgctgta
cgatttccccgtatcttaaactggagaaaagataaacctgttgaagaagcggatacatta
gaaaaccttcgaaatatgctatatcaatttaaataa

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