KEGG   Solitalea canadensis: Solca_4406
Entry
Solca_4406        CDS       T02084                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
scn  Solitalea canadensis
Pathway
scn03410  Base excision repair
scn03430  Mismatch repair
scn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:scn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Solca_4406
   03430 Mismatch repair
    Solca_4406
   03440 Homologous recombination
    Solca_4406
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:scn03400]
    Solca_4406
DNA repair and recombination proteins [BR:scn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Solca_4406
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Solca_4406
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Solca_4406
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1 Toprim
Other DBs
NCBI-ProteinID: AFD09396
UniProt: H8KN63
Position
complement(5109289..5110989)
AA seq 566 aa
MDKRWITHSDYKNDVVDLLSQELNVSPIIAKLLERRGIVDFDSAKDFFRPDIRHLHDPFL
MLDMEKAIDRIEEAIKNQEKILIYGDYDVDGTTSVSLVYSFFKKFYNNLSYYIPDRYKEG
YGISTKGIDWAEENNHSLIIALDCGIKSVDKIDYANEKGIDFIICDHHLPGDEVPYAIAV
LDPKRHDCEYPYKELSGCGIGFKLIQAFAEKNNMPFTYLEPFLDLVAVSIASDIVPITGE
NRTLAFYGLKRINENPCEGLKALIDLSAQKEAITITDIVFQIGPRINAAGRIDDAKHAVH
LLISGSSELATEKGQLVNLKNTERKEFDNSITGEALAMLESDPSQQTRKSTVLFSPTWHK
GVIGIVASRLIEKYYRPTIILTESNGKATGSARSVNGFDIHEAISACSDLLEQYGGHKYA
AGLTIPLENITAFINKFEEVVASTIEERSLSQEIEIDEYVKLNTIEPKLVRIIKQFAPFG
PGNMKPTFASKNVWCKGEPQVVGNNHLKFTVQQSEGYFFDCIGFNLGQHYQRIRKGIPFD
ICYSIEENTWNGKTTIQLNVKDIKFE
NT seq 1701 nt   +upstreamnt  +downstreamnt
atggataaaaggtggattacacattcggattataaaaatgacgtggtggacttgttgtcg
caggaactgaatgtttcacccattatcgctaaactactcgaaagacgtggtatcgttgat
tttgatagtgccaaagatttttttcgccctgatataagacatctacatgatcccttcctg
atgcttgacatggaaaaagcgatcgaccggattgaagaagcaataaaaaatcaagaaaag
atccttatttacggagattatgatgtagatggaactacttcagtttcgctggtttacagt
ttctttaaaaagttttacaataatcttagttactatatccccgacaggtataaagagggc
tatggtatttcaactaaaggcattgactgggctgaggaaaacaaccattcgttaattatt
gcgcttgattgcggcattaaatctgttgataagattgattacgcaaatgaaaaaggaatt
gattttattatttgtgatcaccatttaccaggcgatgaggttccttacgctatagctgtt
cttgatcccaaaagacatgattgtgaatatccctataaggagctttccggttgtggaatc
ggctttaaactcattcaggcatttgcagaaaaaaacaatatgccgtttacttacctcgaa
ccctttctcgatctggttgcggtcagtattgcctctgatattgttcctattaccggagaa
aacagaacgcttgctttttatgggctgaaaagaattaatgaaaacccctgtgaaggatta
aaagcattaatagacctttccgctcaaaaagaagcaataacaataactgacattgttttt
cagattggacctcgaattaatgccgccggtcgtattgatgatgctaaacatgcggtgcat
ttattaatttcaggttcatcagaattggccactgaaaaaggacagctggttaatcttaaa
aacaccgaacgcaaggagtttgataacagtattacaggtgaagcattggcaatgctggaa
tccgacccaagtcagcagactcgtaaatcaacagttttattttctcctacctggcataag
ggagttatcggtatcgttgcttcgcgactgattgaaaaatattatcgtcctaccatcatt
cttactgagtcaaacggcaaagccacaggttctgcccgctctgttaacggatttgatatt
catgaagcgataagtgcttgcagtgatcttttggaacagtatggtggacataaatatgct
gcggggcttaccattcctcttgagaatataacggcatttatcaataagttcgaagaagtt
gttgcatcaaccattgaagaacgttcgctttctcaggaaattgaaattgatgaatacgta
aaattaaataccattgaacctaaattagtacggattattaagcaatttgccccttttgga
ccgggcaatatgaagcctacttttgcctcaaaaaatgtatggtgtaaaggggagccgcaa
gtggtgggaaataatcacttgaagtttaccgttcaacaatcagaaggttatttttttgat
tgcataggttttaatttaggccagcattatcaacgcataagaaaaggtattccatttgat
atttgttacagtattgaggagaatacctggaatggaaaaaccaccattcaattaaatgtt
aaagacataaaatttgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (92)   
   KEGG ORTHOLOGY (1)   
   RefGene (89)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (103)   

Download RDF
DBGET integrated database retrieval system