KEGG   Streptomyces coelicolor: SCO0945Help
Entry
SCO0945           CDS       T00085                                 

Gene name
SCM10.34c
Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sco  Streptomyces coelicolor
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:sco00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    SCO0945 (SCM10.34c)
Enzymes [BR:sco01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     SCO0945 (SCM10.34c)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SCO0945 (SCM10.34c)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
GeneDB: 
Kitasato: 
UniProt: 
Position
complement(990249..991112)
Genome map
AA seq 287 aa AA seqDB search
MPELPEVEALRDFLTEHLTGREIVRVLPVAISVLKTYDPPLTALEGHRVAAVHRHGKFLD
VETAGGPHLVTHLARAGWLHWKDSLPSGLPKPGKGPLALRVALETGAGFDLTEAGTQKRL
AVYVVADPRQVPGVARLGPDPLAADFDEARFAALLDGERRQLKGALRDQSLIAGVGNAYS
DEVLHAAKMSPFKLAASLTDEETARLYAALRDTLTEAVERSRGIAAGRLKAEKKSGLRVH
GRTGEPCPVCGDTIREVSFSDSSLQYCPTCQTGGKPLADRRMSRLLK
NT seq 864 nt NT seq  +upstreamnt  +downstreamnt
atgccagaactgcccgaggtcgaggcgctccgcgacttcctgaccgaacacctcaccggc
cgcgagatcgtccgggtcctgcccgtggcgatcagcgtcctgaagacgtacgaccccccg
ctcacggcgctggaggggcaccgcgtggcggccgtgcaccgccacggcaagttcctcgac
gtggagaccgccggcggcccgcacctggtgacccacctggcccgggccggctggctgcac
tggaaggacagcctccccagcggcctgcccaagcccggaaagggcccgctcgcgctgcgg
gtcgccctggagaccggcgccggcttcgacctgacggaggcgggcacgcagaagcggctc
gcggtctacgtcgtggccgacccgcggcaggtgccgggcgtggcccggctcgggcccgac
ccgctcgccgccgacttcgacgaggcacgcttcgccgccctcctcgacggggagcggcgg
cagctcaagggcgccctgcgcgaccagagcctgatcgcgggcgtggggaacgcgtacagc
gacgaggtcctgcacgccgcgaagatgtcgccgttcaagctggccgcctccctcaccgac
gaggagaccgcccggctgtacgcggcgctgcgcgacacgctcaccgaggccgtggagcgc
tcccggggcatcgccgccggacgcctgaaggccgagaagaagagcggactgcgggtccac
ggccgcaccggagagccctgcccggtgtgcggggacaccatccgcgaggtctccttcagc
gactcctcgctccagtactgcccgacctgccagaccggcggcaaaccgctcgcggaccgc
aggatgtcccggctgctgaagtag

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