KEGG T00085: SCO5281

Streptomyces coelicolor: SCO5281

Entry

SCO5281 CDS T00085

Gene name

kgd

Definition

alpha-ketoglutarate decarboxylase (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

sco Streptomyces coelicolor

Pathway

sco00020	Citrate cycle (TCA cycle)
sco00310	Lysine degradation
sco00380	Tryptophan metabolism
sco01100	Metabolic pathways
sco01110	Biosynthesis of secondary metabolites
sco01120	Microbial metabolism in diverse environments

Module

sco_M00009	Citrate cycle (TCA cycle, Krebs cycle)
sco_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:sco00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:sco00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:sco00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh 2-oxoacid_dh AF0941-like PHA_synth_III_E

Other DBs

NCBI-GI:

NCBI-GeneID:

GeneDB:

Kitasato:

UniProt:

Position

complement(5749846..5753664)

AA seq 1272 aa
MSPQSPSNSSISTDTDQAGTAGKNPAAAFGANEWLVDEIYQQYLQDPNSVDRAWWDFFAD
YKPGAAATPTAAGTVPTDAGSTPPAAPAPRAQAPAQPQAAAPAPAPAKPAAAAPAAPAAP
ATKPAAAPAKPAAKPQAKAAAPAKDAGAAPEGPELVTLRGPAAAVAKNMNASLELPTATS
VRAVPVKLLFDNRIVINNHLKRARGGKISFTHLIGYAMVQAIKAMPTMNHSFGEKDGKPT
LVKPAHINLGLAIDLVKPNGDRQLVVAAIKKAETLNFFEFWQAYEDIVRRARDNKLTMDD
FTGVTVSLTNPGGLGTVHSVPRLMPGQSVILGVGSMDYPAEFQGTSQDTLNKLGISKVMT
LTSTYDHRVIQGAASGEFLRQVANLLLGENGFYDDIFKALRIPYEPVRWLKDIDASHDDD
VTKAARVFELIHSYRVRGHVMADTDPLEYQQRKHPDLDITEHGLTLWDLEREFAVGGFAG
KSLMKLRDILGVLRDSYCRTTGVEFMHIQDPKQRKWIQDRIERSHTKPEREEQLRILRRL
NAAEAFETFLQTKYVGQKRFSLEGGESVIPLLDAVIDSAAESRLDEVVIGMAHRGRLNVL
ANVVGKSYAQIFREFEGNLDPKSMHGSGDVKYHLGAEGTFTGLDGEQIKVSLVANPSHLE
AVDPVLEGVSRAKQDIINKGGTDFTVLPVAIHGDAAFAGQGVVAETLNMSQLRGYRTGGT
VHVVINNQVGFTAAPESSRSSMYATDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQAF
NKDVVIDLICYRRRGHNETDNPAFTQPLMYDLIDKKRSVRKLYTESLIGRGDITLEEAEQ
ALQDYQGQLEKVFTEVREAVSQPASAEPSEPQAEFPVAVNTAITAETVKRIAESQVNIPD
HITVHPRLLPQLQRRAAMVEDGTIDWGMGETLAVGSLLLDGVPVRLTGQDSQRGTFGQRH
AVVIDRETGDEFTPLLYLSEDQARYNVYNSLLSEYAVMGFEYGYSLARPDALVMWEAQFG
DFVNGAQTVVDEFISSAEQKWNQTSGVTLLLPHGYEGQGPDHSSARPERFLQLCAQNNMT
VAMPTLPSNYFHLLRWQVHNPHHKPLVVFTPKSMLRLKAAASKAEEFTTGQFRPVIGDDS
VDPAAVKKVVFTAGKVYYDLDAERKKRGLTDTAIIRIERLYPLPGAELQAEIAKYPNAEK
YLWAQEEPANQGAWPFIALNLIDHLDLAVGADVPHGERLRRISRPHGSSPAVGSAKRHQA
EQEQLVREVFEA

NT seq 3819 nt +upstreamnt +downstreamnt
gtgtcgccacagtcccccagtaactcgagcatctcgaccgacaccgaccaagcgggcacc
gcgggaaagaaccccgcggccgcgttcggtgccaatgagtggctcgtcgacgagatctat
cagcagtacctccaggacccgaactccgtggaccgagcctggtgggacttcttcgccgac
tacaagcccggagcggcggcgaccccgaccgccgccggcaccgtgcccacggacgccggc
agcacgccaccggccgcccccgccccgcgggcgcaggccccggcgcagccgcaggccgcc
gccccggcgcccgcccccgcgaagcccgccgccgccgcccccgcggctccggccgctccg
gccaccaagcccgccgccgcgccggccaagccggccgccaagccgcaggcgaaggccgcc
gcgcccgccaaggacgccggcgccgcccccgagggccccgagctggtgaccctgcgcggc
ccggccgccgcggtcgcgaagaacatgaacgcctcgctggagctgcccacggccacgtcc
gtgcgcgcggtcccggtgaagctgctgttcgacaaccgcatcgtcatcaacaaccacctc
aagcgcgcccggggcgggaagatctccttcacgcacctgatcggctacgcgatggtgcag
gccatcaaggccatgccgacgatgaaccactcgttcggcgagaaggacggcaagccgacc
ctggtcaagccggcccacatcaacctcggcctcgccatcgacctggtcaagcccaacggc
gaccgccagctggtcgtcgcggcgatcaagaaggccgagacgctgaacttcttcgagttc
tggcaggcctacgaggacatcgtccgtcgcgcccgcgacaacaagctgacgatggacgac
ttcaccggcgtcacggtctccctgaccaaccccggcggcctcggcaccgtccactccgtg
ccgcgcctgatgcccggccagtcggtcatcctgggcgtcggctccatggactacccggcg
gagttccagggcaccagccaggacaccctgaacaagctcggcatctcgaaggtcatgacg
ctcacgtcgacctacgaccaccgggtcatccagggcgccgcctccggcgagttcctgcgc
caggtcgccaacctgctgctgggcgagaacggcttctacgacgacatcttcaaggcgctg
cgcatcccctacgagccggtccgctggctcaaggacatcgacgcctcgcacgacgacgac
gtcaccaaggccgcccgcgtcttcgagctgatccactcctaccgggtgcgcggccacgtc
atggccgacaccgacccgctggagtaccagcagcgcaagcaccccgacctggacatcacc
gagcacgggctcaccctgtgggacctggagcgcgagttcgcggtcggcggcttcgccggc
aagtccctgatgaagctgcgcgacatcctcggcgtgctgcgcgactcgtactgccgcacc
accggcgtcgagttcatgcacatccaggacccgaagcagcgcaagtggatccaggaccgc
atcgagcgctcgcacaccaagccggagcgcgaggagcagctgcgcatcctgcgccggctg
aacgccgccgaggcgttcgagaccttcctccagaccaagtacgtcggccagaagcggttc
tccctggagggcggcgagtccgtcatcccgctgctcgacgcggtcatcgactcggcggcc
gagtcccgcctggacgaggtcgtcatcggcatggcccaccgcggccggctgaacgtgctg
gccaacgtggtcggcaagtcgtacgcgcagatcttccgcgagttcgagggcaatctcgac
ccgaagtcgatgcacggctccggcgacgtgaagtaccacctgggcgccgagggcaccttc
accggtctggacggcgagcagatcaaggtctcgctggtcgccaacccctcgcacctggag
gcggtggacccggtcctggagggcgtctcgcgcgccaagcaggacatcatcaacaagggc
ggcacggacttcacggtcctgccggtggcgatccacggcgacgcggccttcgcgggccag
ggcgtggtggccgagaccctgaacatgtcgcagctgcgcggctaccgcaccggcggcacg
gtccacgtcgtcatcaacaaccaggtcggcttcaccgccgccccggagtcctcgcgctcc
tcgatgtacgccaccgacgtggcccgcatgatcgaggccccgatcttccacgtgaacggc
gacgaccccgaggccgtcgtccgcgttgcccggctggccttcgagttccgccaggcgttc
aacaaggacgtggtgatcgacctcatctgctaccgccgccgcggtcacaacgagaccgac
aacccggccttcacccagccgctgatgtacgacctgatcgacaagaagcgctcggtgcgc
aagctgtacaccgagtccctcatcggtcgcggcgacatcaccctggaagaggccgagcag
gcgctccaggactaccagggccagctggagaaggtcttcaccgaggtccgcgaggccgtc
tcgcagccggcgtcggcggagccctcggagccgcaggcggagttcccggtcgccgtgaac
accgcgatcaccgccgagaccgtcaagcgcatcgccgagtcccaggtcaacatccccgac
cacatcaccgtgcacccgcggctgctgccgcagttgcagcgccgcgcggcgatggtcgag
gacggcacgatcgactggggcatgggcgagaccctcgccgtcggctccctcctgctggac
ggcgtgccggtccggctgaccggccaggactcgcagcgcggcaccttcggccagcgccac
gcggtcgtcatcgaccgtgagacgggcgacgagttcaccccgctgctgtacctgtccgag
gaccaggcccggtacaacgtctacaactccctcctctccgagtacgcggtgatgggcttc
gagtacggctactcgctggcccgcccggacgcgctggtgatgtgggaggcgcagttcggc
gacttcgtcaacggcgcgcagacggtcgtggacgagttcatctcgtcggccgagcagaag
tggaaccagacctccggcgtcaccctgctcctgccgcacggctacgagggccagggcccg
gaccactcctcggcccgcccggagcgcttcctccagctgtgcgcgcagaacaacatgacg
gtcgcgatgccgaccctgccgtcgaactacttccacctcctgcggtggcaggtgcacaac
ccgcaccacaagccgctggtggtcttcaccccgaagtcgatgctgcgcctcaaggcggcg
gcctcgaaggcggaggagttcacgacgggccagttccgcccggtcatcggcgacgactcg
gtcgacccggccgccgtcaagaaggtcgtcttcacggccggcaaggtctactacgacctc
gacgccgagcggaagaagcgcggcctgacggacacggccatcatccgcatcgagcgcctg
tacccgctgccgggtgccgagctccaggcggagatcgccaagtacccgaacgccgagaag
tacctgtgggcccaggaggagccggcgaaccagggcgcttggccgttcatcgcgctcaac
ctgatcgaccacctggacctggcggtcggcgccgacgtcccgcacggcgagcgcctgcgc
cgcatctcgcggccgcacggctcgtccccggccgtcggttccgccaagcggcaccaggcc
gagcaggagcagctggtgcgtgaggtgttcgaggcgtga

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   GENEDB (1)   
   KITASATO-SCO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (40)   

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