KEGG   Streptomyces coelicolor: SCO5573Help
Entry
SCO5573           CDS       T00085                                 

Gene name
SC7A1.17
Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sco  Streptomyces coelicolor
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:sco00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    SCO5573 (SC7A1.17)
Enzymes [BR:sco01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     SCO5573 (SC7A1.17)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SCO5573 (SC7A1.17)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
GeneDB: 
Kitasato: 
UniProt: 
Position
6070914..6071774
Genome map
AA seq 286 aa AA seqDB search
MPELPEVEVVRRGLERWAAHRTVADVEVLHPRAVRRHVAGPDDFAHRLKDHRIGTPSRRG
KYLWLPLEDTDQAVLAHLGMSGQLLVQPHETPAEKHLRIRVRFADALGTELRFVDQRTFG
GLSLHDTSADGLPDVIAHIARDPLDPLFDDEAFHHALRRKRTTIKRALLDQSLISGVGNI
YADEALWRARLHYERPTATLTRPRTTELLGHVRDVMNAALAVGGTSFDSLYVNVNGESGY
FDRSLDAYGREGMPCRRCATPMRRRPWMNRSSYFCPKCQRPPRVTP
NT seq 861 nt NT seq  +upstreamnt  +downstreamnt
atgcccgagttgcccgaggtagaggtcgtacggcgcggcctggagcgctgggccgcccac
cgaacggtcgccgacgtcgaggtactgcacccgcgtgcggtgcgccgccatgtcgcgggt
cccgacgacttcgcccaccgcctgaaggaccaccgcatcggcacgcccagccgccgcggc
aagtacctgtggctgcccctcgaggacaccgaccaggccgtcctcgcccatctcggcatg
agcggccagctcctggtccagccgcacgagacacccgccgagaagcacctgcgcatccgg
gtccgcttcgccgacgccctcggcaccgaactccgcttcgtcgaccagcgcaccttcggc
ggcctctccctgcacgacacgtccgccgacggactgcccgacgtcatcgcacacatcgcc
cgcgacccgctggaccccctcttcgacgacgaggcgttccaccacgccctgcgccgcaag
cgcaccacgatcaaacgggccctgctcgaccagtccctgatcagcggcgtcggcaacatc
tacgcggacgaggccctctggcgcgcccgcctccactacgaacgccccaccgcgaccctc
acccgcccccgcaccaccgaactgctcggccacgtccgggacgtgatgaacgccgccctc
gccgtcggcggcaccagcttcgacagcctctacgtcaacgtcaacggcgagtccggctac
ttcgaccgctcgctcgacgcgtacggccgcgagggcatgccctgccgccgctgcgccaca
ccaatgcgccgccggccgtggatgaaccgctccagctacttctgtccgaagtgccagcgc
ccgccccgggtcacgccgtag

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