KEGG   Streptococcus parasanguinis ATCC 15912: HMPREF0833_11239
Entry
HMPREF0833_11239  CDS       T01545                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
scp  Streptococcus parasanguinis ATCC 15912
Pathway
scp03030  DNA replication
scp03430  Mismatch repair
scp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:scp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HMPREF0833_11239 (dnaQ)
   03430 Mismatch repair
    HMPREF0833_11239 (dnaQ)
   03440 Homologous recombination
    HMPREF0833_11239 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:scp03032]
    HMPREF0833_11239 (dnaQ)
   03400 DNA repair and recombination proteins [BR:scp03400]
    HMPREF0833_11239 (dnaQ)
Enzymes [BR:scp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HMPREF0833_11239 (dnaQ)
DNA replication proteins [BR:scp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HMPREF0833_11239 (dnaQ)
DNA repair and recombination proteins [BR:scp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HMPREF0833_11239 (dnaQ)
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like
Other DBs
NCBI-ProteinID: AEH56270
UniProt: F8DKB3
Position
1296804..1297397
AA seq 197 aa
MKALEDYIAFDLEFNQYEGAYQIIQVSAVRFTDGKEVDHYDSYVYTDKPLKSFINGLTGI
TQDKIQNAPQLEQVLSEFKAFVGDRPLIGYNAKKSDLPILLENGLDLEDQYAVDVFDEAF
ERRPSDLHGIKNLQLHTVAEFLGVAGKSHDSLEDARMTALVYEQFLEFDQGRTLLEEQEN
FSTNPFGGLDLSGFFDE
NT seq 594 nt   +upstreamnt  +downstreamnt
atgaaagcattagaagattatatcgcctttgatctcgaatttaaccaatacgaaggcgcc
tatcagatcatccaggtgtctgccgtacgctttacggacggtaaagaagtcgatcactac
gactcctacgtttacaccgataagcccctaaaaagctttattaacggcctgactggcatt
acccaggacaagatccaaaatgccccacaactagaacaggtcctcagcgaattcaaggcc
tttgtaggagaccggcccttgatcggatacaatgccaaaaaaagcgacctacccattctg
cttgaaaatgggctggatctagaagaccagtacgctgtcgatgtctttgacgaggctttc
gaacgtcgtccatctgacctccacggcattaaaaatctccaactccacaccgttgcagaa
tttttgggagttgcaggaaaatcacacgatagcttagaggacgcccgcatgacagccctt
gtctacgaacaattcctcgaatttgatcaaggccgcaccctccttgaagagcaagagaac
ttctccaccaaccccttcggaggcttggacttatccggattttttgatgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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