KEGG   Streptococcus parasanguinis ATCC 15912: HMPREF0833_11992
Entry
HMPREF0833_11992  CDS       T01545                                 
Symbol
cshB
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
  KO
K18692  ATP-dependent RNA helicase CshB [EC:5.6.2.7]
Organism
scp  Streptococcus parasanguinis ATCC 15912
Brite
KEGG Orthology (KO) [BR:scp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scp03019]
    HMPREF0833_11992 (cshB)
   03009 Ribosome biogenesis [BR:scp03009]
    HMPREF0833_11992 (cshB)
Enzymes [BR:scp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     HMPREF0833_11992 (cshB)
Messenger RNA biogenesis [BR:scp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     HMPREF0833_11992 (cshB)
Ribosome biogenesis [BR:scp03009]
 Prokaryotic type
  rRNA helicases
   HMPREF0833_11992 (cshB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_RecD PHD_like XisI
Other DBs
NCBI-ProteinID: AEH57023
UniProt: F8DIN1
Position
2120171..2121532
AA seq 453 aa
MKGTEKMKFTEFNFKPYIQEALKEINFREATEVQEKLIPIVLAGNDLVGESKTGSGKTHT
FLLPIFQTLNEESEQVEAVITAPSRELATQIYQAARQIASHSEKEIRIVNYVGGTDKSRQ
IEKLQVKQPHIVIGTPGRIYDLVASGDLAIHKAHTFVVDEADMTLDMGFLSTVDKIASRL
PQQLQFLVFSATIPQKLQPFLKKYLSNPVMEQIKTKTVISETIDNWLVSTKGRDKNEQIY
QLTKTLQPYLAMIFVNTKTRADDLHAYLVAQGLKVAKIHGDIPPRERKRIMNQVKNLDFE
YIVATDLAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLPGVAITLYQPSDDSDI
RELEKMGIRFVPKVLKNGVIEDTYDRDRRANREKKQEKLDIEMIGLVKKKKKKIKPGYKK
KIKWAVDEKRRKAKRAENRARGRAERKAKRQTF
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgaaaggaactgagaaaatgaaatttacagagtttaattttaagccctatattcaagag
gcattgaaagaaatcaattttagagaagcaaccgaagtacaggaaaaactaattccgatt
gtcctagctggaaatgatttggtaggagagtcaaagactggttctgggaaaacccatacg
ttcctcttgccaatttttcaaactttaaatgaagaaagcgaacaagttgaagcggtcatc
acggctcctagtcgagagttggcaacgcaaatttaccaagctgcccgtcaaattgctagt
cattctgaaaaagagattcggattgtaaattatgttggaggaacggataaaagccgtcag
attgaaaaactgcaggtcaaacaaccgcatatcgtgattgggactccaggccggatctat
gatctggttgcatctggtgatctggctattcataaggctcatacctttgtggtagacgag
gcagatatgacactggacatgggatttctgtctactgtggataagattgcttcgagactt
ccgcaacaactgcaatttttagttttttcagccaccattccgcaaaaattacaacctttt
ttgaaaaaatatctctcaaacccagtcatggagcaaattaagactaagacggtgatttca
gagaccatcgataattggctggtttcgaccaagggtcgggataaaaatgagcaaatttac
caattgaccaagactttgcaaccttatttagccatgattttcgtcaatacaaaaacgaga
gcagatgaccttcatgcctatttggtggctcagggattgaaagtggcgaagattcacgga
gatattccaccacgtgaacggaaacggatcatgaatcaggttaaaaatcttgattttgag
tatattgtggccaccgatttggcggctcgtggaattgatatcgaaggggtgagtcatgtc
atcaacgatgctattccacaagatctttccttcttcgttcaccgtgttggccggacaggc
cgcaatggtctaccaggtgtcgctattactctttatcaaccgagtgatgattcagatatc
cgtgaactagaaaaaatgggaattcgtttcgtaccgaaagtgttgaaaaatggggttatt
gaagatacttatgatcgggacagacgggcgaatcgtgagaaaaagcaagagaaacttgac
atcgagatgattggtctggtgaaaaagaaaaagaaaaaaatcaaaccaggctacaagaaa
aaaatcaaatgggcagttgatgaaaagcggagaaaggctaagcgagctgaaaatcgtgcg
cgtggccgggcggaacgaaaggccaaacgacaaactttctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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