KEGG   Streptomyces cattleya NRRL 8057: SCAT_0253Help
Entry
SCAT_0253         CDS       T01646                                 

Definition
DNA-(Apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sct  Streptomyces cattleya NRRL 8057
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:sct00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    SCAT_0253
Enzymes [BR:sct01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     SCAT_0253
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SCAT_0253
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(306575..307441)
Genome map
AA seq 288 aa AA seqDB search
MPELPEIEALAGFLTGKLDGHTVSRIYPVAVSALKTYDPPLTALHGRILGPVRRHGKFLD
ITAGDLHLVVHLARAGWVRWREGLPTTPPKMGKGPLALRLLLADPPGCGLDLTEAGTQRR
LAVHCVTDPREVPGIASLGVDPFDPAFTLDALTGLLRGERRRIKGVLRDQSVIAGIGNAY
SDEVLHAARLSPYKLAADLTGEETARLHQAVTGTLTEAVERSRGLVAGDLKAEKKRTMRV
HGRTGQPCPACGDTIREVSFADSSLQYCPTCQTGGRPLADRRLSRLLK
NT seq 867 nt NT seq  +upstreamnt  +downstreamnt
atgccggaactcccggagatcgaagccctcgccggattcctcaccggcaagctcgacggg
cacaccgtgtcccggatctacccggtcgcggtcagcgcgctcaagacgtacgacccgccg
ctgaccgcgctgcacggacgcatcctcggcccggtgcggcggcacggcaagttcctcgac
atcaccgcgggcgacctccacctcgtcgtccacctcgcccgcgccggatgggtccggtgg
cgcgaggggctgcccaccacaccgccgaagatgggcaagggaccgctggcgctgcgcctg
ctgctggccgacccgcccggctgcgggctcgacctcaccgaagccggaacccaaaggcgc
ctcgcggtccactgcgtcaccgacccccgcgaggtccccggcatcgcctcgctcggcgtc
gacccgttcgaccccgccttcaccctcgacgccctcaccgggctgctgcggggcgaacgc
cgccggatcaagggcgtgttgcgcgaccagagcgtgatcgccggcatcggcaacgcctac
tccgacgaagtgctgcacgccgcccgcctctccccgtacaaactcgccgccgacctcacc
ggcgaggagaccgcccgcctccaccaggcggtcaccgggacgctgaccgaggccgtcgaa
cgctcccggggactggtcgccggtgacctcaaggccgagaagaaacgcaccatgcgggtg
cacggccgcaccgggcagccctgtccggcgtgcggcgacaccatccgcgaggtctccttc
gccgattcctcgctccagtactgccccacctgccagaccggcggccggcccctcgccgac
cgcaggctctcccggctgctgaagtga

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