KEGG   Staphylococcus condimenti: A4G25_06675
Entry
A4G25_06675       CDS       T04648                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
scv  Staphylococcus condimenti
Pathway
scv03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:scv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    A4G25_06675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scv03021]
    A4G25_06675
   03400 DNA repair and recombination proteins [BR:scv03400]
    A4G25_06675
Enzymes [BR:scv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     A4G25_06675
Transcription machinery [BR:scv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     A4G25_06675
DNA repair and recombination proteins [BR:scv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      A4G25_06675
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 DUF2171
Other DBs
NCBI-ProteinID: AMY05640
UniProt: A0A143PBC6
Position
complement(1320706..1324257)
AA seq 1183 aa
MAGKFVQYGRHRKRRNYARISEVLELPNLIEIQTKSYDWFLKEGLLEMFRDISPIEDFTG
NLSLEFVDYRLGEPKYDLEESKNRDATYAAPLRVKVRLINKETGEVKDQEVFMGDFPLMT
DTGTFVINGAERVIVSQLVRSPSVYFNEKIDKNGRENYDATVIPNRGAWLEFETDAKDIV
YVRIDRTRKLPLTVLLRALGYSSDQSIIDLLGDNEYLRNTLEKDSTENTEQALLEIYERL
RPGEPPTVENAKSLLYSRFFDPKRYDLASVGRYKMNKKLHLKHRLFNQKLAEPIVNSDTG
EIVADEGTVLDRRKLDEIMDVLESNANIEVDELDGSIVNEPVEIQSIKVYVPNDEEGRTT
TVIGNAFPDSEVKCITPADIVASMSYFFNLLHGIGQTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTDSITPQQLINIRPVIASIKEFFGSSQLSQFMDQANPLAELT
HKRRLSALGPGGLTRERAQMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYARVNEFG
FIETPYRKVDLETNTVTDQIDYLTADEEDSYVVAQANSRLDDEGHFISEEVVCRFRGNNT
MMDREKMDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMNPESPFVGTG
MEHATARDSGAAVINKHFGRVEHVESNEIKVRRIIEEDGQQYDGELDTYRLAKFKRSNSG
TCYNQRPIVKDGDIVSQGEILADGPSMELGEMALGRNVVVGFMTWDGYNYEDAVIMSERL
VKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVAESALKNLDERGIVYVGAEVKDGDI
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKVFNREDGDDS
LSPGVNQLVRVYIVQKRKIHVGDKMCGRHGNKGVISKIVPEEDMPYLPDGTPIDIMLNPL
GVPSRMNIGQVLELHLGMAAKNLGIHVASPVFDGANDDDVWSTIEEAGMARDGKTVLYDG
RTGEPFDNRISVGVMYMLKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTYKSDDTVGRVKTYEAIVKGENISKPSVPESFRVLMKELQSLGL
DVKVMDEDDKEIEMADVDEDDVNEHKVNIQQSSIPESQKETTD
NT seq 3552 nt   +upstreamnt  +downstreamnt
ttggcaggtaaatttgtccaatatggaagacatcgtaaacgtagaaattacgcgagaatt
tctgaggttttagagttaccaaaccttatcgaaattcaaacgaaatcgtatgactggttc
ttaaaagaaggattacttgaaatgttccgagatatttctccaattgaagatttcacagga
aacctatctttagaatttgttgattacagattaggtgaaccaaaatatgatttagaggaa
tctaagaaccgtgacgcaacttatgctgcacctcttcgtgtcaaagtgcgtcttattaac
aaagaaacaggagaagtgaaagaccaagaagtatttatgggtgatttcccattaatgact
gacactggtactttcgtaattaatggtgctgaacgtgttatcgtttcacaattagttcgt
tctccatccgtatatttcaatgaaaaaatagataaaaacggccgtgaaaactatgatgcg
actgtaattcctaaccgtggtgcttggttagaatttgaaactgatgcaaaagacatcgtt
tatgtacgtattgatagaactagaaaattgccgttaactgtattacttcgtgcacttggt
tattcatctgaccaatcaattattgatttattaggtgacaatgagtacttacgtaatacg
cttgaaaaagatagtactgaaaatactgaacaagcattattagaaatttatgaacgttta
cgccctggcgaaccacctacagtagaaaacgcaaaaagcttgctctactctcgtttcttc
gatccaaaacgttatgatttagcgagcgtaggtcgttacaaaatgaacaaaaaacttcat
ttaaaacatcgtttattcaaccaaaaattggctgaaccgattgttaatagtgatactggt
gaaattgttgctgatgaaggtactgtattagaccgtcgtaaattagacgaaatcatggac
gtattagagtctaatgcgaacatcgaagtagatgaattagatggcagcattgtaaatgaa
ccagtggaaattcaatctattaaagtttatgtaccaaatgatgaagaaggcagaacaaca
actgttatcggtaatgctttccctgactctgaagttaaatgcattactccagcagatatc
gtggcttctatgtcatatttcttcaacttgttacatggtatcggacaaactgatgatatt
gaccatttaggtaaccgtcgtttacgttcagtaggcgaattgcttcaaaaccaattcaga
atcggtttatcaagaatggaacgtgttgtacgtgaaagaatgtcaattcaagatactgac
tctatcacaccgcaacaacttatcaatatccgtccggttattgcttcaattaaagagttt
ttcggaagctctcaattgtctcaattcatggaccaagcgaacccattagcagagttgaca
cataaacgtcgtttatctgcattagggcctggtggtttaactcgtgaacgtgctcaaatg
gaagtacgtgacgttcactattctcactatggccgtatgtgtccaatcgaaactcctgag
ggtccaaacatcggtttgatcaactcattatctagttatgcacgtgtgaacgaattcggt
tttattgaaacaccataccgtaaagttgaccttgaaactaatactgtcactgaccaaatt
gactatctaacagctgatgaagaagacagctatgttgtagcccaagcaaactctcgctta
gatgatgaaggacacttcatcagtgaagaagttgtttgtcgtttccgcggtaacaacaca
atgatggatagagaaaaaatggactacatggacgtatcaccaaaacaagtagtatcagct
gcgacagcatgtatcccattcttagaaaacgatgactctaaccgtgcattaatgggtgcg
aacatgcaacgtcaagcagtaccattgatgaatccagaatctccatttgttggaacaggt
atggaacatgcaactgctcgcgactcaggtgctgcagttatcaataaacattttggtcgt
gtagaacatgttgaatcaaacgaaattaaagttcgtcgtattattgaagaagatggacaa
caatatgatggtgaattagatacgtacagattagctaaattcaaacgttctaactctggt
acttgttacaaccaacgtcctatcgtaaaagatggcgacattgtaagccaaggagaaatc
ttagcagatggtccttcaatggaacttggtgaaatggcattaggccgtaacgtagttgta
ggatttatgacttgggacggttataactatgaagatgctgtaatcatgagcgaacgcctt
gttaaagatgacgtttatacttcaatccatatcgaagaatatgaatctgaagcgcgtgat
actaaacttggacctgaagaaatcactcgtgatattcctaacgttgcagaaagtgcactt
aaaaatttagacgaacgcggaattgtatacgttggtgctgaagtaaaagatggtgacatc
ttagttggtaaagtaacacctaaaggtgtaactgaattaactgctgaagaaagattatta
catgctatctttggtgaaaaagcacgtgaagttcgcgatacttcattacgtgtacctcat
ggtgcaggcggaatcgttctagatgttaaagtattcaaccgtgaagacggcgatgattca
ttatctcctggtgtaaaccaattagtacgtgtttacattgttcaaaaacgtaaaatccac
gttggggataaaatgtgtggtcgtcatggtaacaaaggggttatctctaagattgttcct
gaagaagatatgccttatttaccagacggaacaccaattgatatcatgttgaacccactt
ggtgtaccatcacgtatgaacatcggacaagtacttgagttgcatttaggtatggctgct
aaaaacttaggcatccacgttgcttcaccagtatttgatggtgctaacgatgacgatgta
tggtctacaattgaagaagctggtatggcaagagatggtaaaactgtattatatgatgga
cgtacaggtgaaccattcgataaccgtatttcagtcggcgtaatgtacatgttgaaactt
gcgcacatggttgatgacaaattacatgcgcgttcaactggtccttactcacttgttaca
caacaaccattgggtggtaaagctcaattcggtggacaacgtttcggtgagatggaggta
tgggcacttgaagcatatggtgctgcgtacacattacaagaaatcctaacttataaatcc
gatgatactgtaggtcgtgtaaaaacatatgaagcgatcgttaaaggtgaaaacatctct
aaaccaagtgttcctgaatcattccgagtattgatgaaagaattacaaagtttaggtctt
gatgttaaagtcatggatgaagatgataaagaaattgaaatggcagatgttgatgaagat
gatgtaaatgaacacaaagtcaacatccaacaatcttcaattcctgaatcacaaaaggaa
actactgactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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