KEGG   Streptomyces sp. CdTB01: AS200_12930
Entry
AS200_12930       CDS       T04240                                 
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
scx  Streptomyces sp. CdTB01
Brite
KEGG Orthology (KO) [BR:scx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:scx03032]
    AS200_12930
   03400 DNA repair and recombination proteins [BR:scx03400]
    AS200_12930
Enzymes [BR:scx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     AS200_12930
DNA replication proteins [BR:scx03032]
 Prokaryotic type
  DNA Topoisomerases
   AS200_12930
DNA repair and recombination proteins [BR:scx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AS200_12930
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c
Other DBs
NCBI-ProteinID: ALV32855
UniProt: A0A0U3N8L8
Position
complement(2948356..2950479)
AA seq 707 aa
MTAETSVSSTALLAGAERDGSNYTARHLLVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEI
IDNSVDEALGGYCDHIEVILHDDGSVEVRDNGRGIPVDVEPKTGLSGVEVVMTKLHAGGK
FGGGSYAASGGLHGVGASVVNALSARLDVEVDRGGHTHAISFRRGVPGAFAGNGPDAKFE
AASGLRKAKKIPKTRSGTRVRYWADRQIFLKDAKLSLVNLHQRARQTAFLVPGLTIVVRD
EFGLGEGGSKGEESFRFDGGISEFCEYLASDRPVCDVLRLSGQGTFRETVPVLDEHGQMT
PTQVTRELDVDVAMRWGTGYDTTLKSFVNIIATPKGGTHVAGFETAVTSTLNEVLRAKKL
LRVAEDDIVKDDALEGLTAVVTVRLAEPQFEGQTKEVLGTSAARRIVNNVINKELKAFLT
STKRDAAAQARVVMEKAVAAARTRIAARQHKDAQRRKTALESSSLPAKLADCRSDDVDRS
ELFIVEGDSALGTAKLARNSEFQALLPIRGKILNVQKSSVTDMLKNAECGAIIQVIGAGS
GRTFDIDAARYGKIIMMTDADVDGSHIRTLLLTLFHRYMRPMVEAGRVFAAVPPLHRIEL
VQPKKGQDKYVYTYSDRELRDKLLEFESKGVRYKDSIQRYKGLGEMDADQLAETTMDPRH
RTLRRINLSDLDAAETVFDLLMGNDVAPRKEFISSSAATLDRSRIDA
NT seq 2124 nt   +upstreamnt  +downstreamnt
gtgaccgccgaaacgtccgtgtcgtccacagcgctgctggcaggagcagagcgggacggt
tccaactacaccgcgcggcacctgctcgtcctcgaggggctcgaggccgtgcgcaagcgt
cccggtatgtacatcggatcgaccgacagccgtggtctgatgcactgcctctgggagatc
atcgacaactcagtcgacgaggccctcgggggctactgcgaccacatcgaggtgatcctc
cacgacgacggctcggtggaggtccgggacaacggccggggcatcccggtcgacgttgag
cccaagacgggcctgtccggcgtcgaggtcgtcatgaccaagctgcacgccggcggcaag
ttcggcggcggctcgtacgccgcctccggcggtctgcacggcgtgggtgcctccgtggtc
aacgcgctgtcggcccgcctggacgtcgaggtcgaccgcggcggtcacacgcacgcgatc
agcttccgccgcggtgtgcccggcgccttcgcgggcaacggcccggacgccaagttcgag
gccgccagcggcctgcgcaaggccaagaagatccccaagacccgcagcggcacgcgcgtg
cgctactgggccgaccgccagatcttcctcaaggacgccaagctctccctggtcaacctc
caccagcgggcccgccagacggcgttcctggtgccgggcctcaccatcgtcgtccgtgac
gagttcggtctcggcgagggtggcagcaagggcgaggagtccttccgtttcgacggcggc
atcagcgagttctgcgagtacctggcgagcgacaggccggtctgtgacgtcctccgcctc
tccggccagggcaccttcagggagacggttccggtcctggacgagcacggccagatgacc
cccacccaggtcacccgcgagctcgacgtcgacgtcgccatgcgctggggcacgggctac
gacacgaccctgaagtcgttcgtgaacatcatcgccacccccaagggcggcactcacgtc
gcgggcttcgagacggccgtcaccagcaccctcaacgaggtcctgcgcgccaagaagctg
ctgcgcgtggccgaggacgacatcgtcaaggacgacgccctggaggggctgacggccgtc
gtcaccgtgcggctcgccgaacctcagttcgagggtcagaccaaggaggtcctcggcacc
tcggcggcccgccggatcgtgaacaacgtgatcaacaaggaactcaaggcgttcctgacc
tccaccaagcgtgacgccgcggcccaggcccgcgtcgtcatggagaaggccgtcgcagcg
gcccgtacgcgcatcgccgcccgtcaacacaaggacgcccagcgccgcaagacggccctg
gagtcctcctcgctgccggcgaaactcgccgactgccgcagcgacgacgtggaccgcagc
gagctcttcatcgtcgagggcgactcggccctcggcaccgccaagctcgcccgcaactcc
gagttccaggcgctgctgccgatccgcggcaagatcctgaacgtccagaagtcgtccgtg
accgacatgctcaagaacgccgagtgcggcgcgatcatccaggtcataggggccggctcc
ggtcgtacgttcgacatcgacgcggcccgctacggcaagatcatcatgatgaccgacgcc
gacgtcgacggctcgcacatccgcacgctgcttctgaccctcttccaccgctacatgcgg
cccatggtcgaggccggccgggtgttcgccgcggtgccgccgctgcaccgcatcgagctg
gtccagccgaagaagggccaggacaagtacgtctacacctactcggaccgggagcttcgc
gacaagctgctcgaattcgagagcaagggtgtccggtacaaggactccatccagcgctac
aagggcctcggtgagatggacgccgaccagctggccgagacgaccatggacccccgccac
cgcaccctgcgccggatcaacctctccgacctggacgcggccgagacggtcttcgacctg
ctgatgggcaacgacgtggcgccgcgcaaggagttcatctccagctccgcggcgacgctg
gaccgctcgcgcatcgacgcgtag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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