KEGG   Streptomyces sp. CdTB01: AS200_22080
Entry
AS200_22080       CDS       T04240                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
scx  Streptomyces sp. CdTB01
Brite
KEGG Orthology (KO) [BR:scx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:scx03032]
    AS200_22080
   03400 DNA repair and recombination proteins [BR:scx03400]
    AS200_22080
Enzymes [BR:scx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     AS200_22080
DNA replication proteins [BR:scx03032]
 Prokaryotic type
  DNA Topoisomerases
   AS200_22080
DNA repair and recombination proteins [BR:scx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AS200_22080
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim HC2 Toprim_4 Toprim_2
Other DBs
NCBI-ProteinID: ALV34444
UniProt: A0A0U3Q3Y0
Position
complement(4941177..4944002)
AA seq 941 aa
MSPTSETAHGGRRLVIVESPAKAKTIKGYLGPGYTVEASVGHIRDLPNGAAEVPEKYTGE
VRRLGVDVDHDFQPIYVVNADKRAQVKKLKDLLKDSDELFLATDEDREGEAIAWHLQEVL
KPKVPVKRMVFHEITKAAIQAAVANPRELNQKLVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFATGRAGDSSDPSSLVARLQTVD
GRRVAQGRDFDSLGQLKSANTLHLDEANARALAAALEQTQFAVRSVESKPYRRSPYAPFR
TTTLQQEASRKLGFGAKATMQVAQKLYENGFITYMRTDSTTLSDTAVAAARAQVTQLYGA
DYLPSSPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFKLYELIWKRTVASQMK
DATGNSVTVKIGGTAADGRDVEFTASGKTITFHGFLKAYVEGADDPNAELDDRERRLPQV
AEGDRLSAEEITVDGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKK
GTALVPSFLSFAVVNLLEKHFGRLVDYDFTARMEDDLDRIARGEAQAVPWLKRFYFGEAN
GIGGAAEAGNGDGDHLGGLKELVTDLGAIDAREVSSFPVGNGIVLRVGRYGPYIERGEKD
SEGHQRADVPEDLAPDELSVELAEELLAKPSGDFELGADPATGHQIIARDGRYGPYVTEV
LPEGTPKTGKNAVKPRTASLFKSMSLDTVTLADALKLMSLPRVVGTDAEGQEITAQNGRY
GPYLKKGTDSRSLTSEEQLFTITLEEALAIYAQPKQRGRAAAKPPLKELGTDPVSEKPVV
VKDGRFGPYVTDGETNATLRSGDSVETITPERGFELLAEKRAKGPAKKTAKKAPAKKAPA
KKATTAKKTAAKKTTAAKKTAAKKTTAAAKKTTAAKTASDD
NT seq 2826 nt   +upstreamnt  +downstreamnt
ttgtccccgaccagcgagaccgcacacggcggccgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagggctacctcggccccggctacaccgtcgaggcgagcgtc
gggcacatccgcgaccttcccaacggcgccgcggaggtgccggagaagtacaccggcgaa
gtccgtcgcctcggtgtcgacgtcgaccatgacttccagcccatctatgtggtcaacgcc
gacaagagggcccaggtcaagaagctcaaggacctgctgaaggactccgacgagctcttc
ctcgccaccgatgaggaccgcgagggcgaggccatcgcgtggcacctccaggaagtcctc
aagcccaaggtcccggtcaagcggatggtcttccacgagatcaccaaggccgcgatccag
gccgccgtcgccaacccgcgcgagctgaaccagaagctggtcgacgcccaggagacccgc
cgtatcctcgaccgcctctacggctacgaggtctcgccggtcctgtggaagaaggtcatg
ccgcgcctgtcggccggccgtgtccagtccgtggcgacccgtctcgtcgtggagcgggaa
cgcgagcgcatcgctttccgttccgccgagtactgggacctgacgggcaccttcgcgacc
ggccgcgccggcgattcgtcggacccgtcgtcgctggtcgcgcgcctgcagaccgtcgac
ggcaggcgtgtcgcgcagggccgcgacttcgactccctgggacagctcaagagcgcgaac
accctccacctcgacgaggcgaacgcccgcgccctggccgccgccctggagcagacgcag
ttcgccgtccgctccgtcgagtcgaagccgtaccgccgctcgccgtacgcccccttccgt
acgaccacgctgcagcaggaggcgagccgcaagctcggcttcggcgccaaggcgaccatg
caggtggcccagaagctgtacgagaacggcttcatcacctacatgcgtacggactccacg
accctcagcgacaccgccgtggccgccgcccgggcccaggtgacgcagctctacggcgcc
gactacctgccgtccagcccgcggacgtacgccgggaaggtcaagaacgcgcaggaggcg
cacgaggcgatccgcccctcgggtgatcgtttccgcacgcccgccgagaccgggctgacc
ggcgaccagttcaagctgtacgaactgatctggaagcgcacggtcgcctcccagatgaag
gacgccaccggcaactccgtcacggtgaagatcggtggcacggccgccgacggccgggac
gtcgagttcaccgcctccggcaagacgatcaccttccacggcttcctcaaggcctacgtc
gagggcgccgacgacccgaacgcggagctggacgaccgcgagcgccggctgccgcaggtc
gccgagggcgaccggctcagcgccgaggagatcacggtcgacgggcacgccacgaagccc
ccggcccgctacaccgaggccagcctcgtcaaggagctcgaagagcgcgagatcggccgc
ccgtcgacgtacgcgtcgatcatcggcacgatcctggaccgcggctacgtcttcaagaag
ggcacggcgctcgtgccgtccttcctgtccttcgccgtggtcaacctcctggagaagcac
ttcggtcggctcgtcgactacgacttcaccgccaggatggaggacgacctcgaccgcatc
gcccgcggcgaggcgcaggccgtgccgtggctgaagcggttctacttcggcgaggccaac
ggcatcggcggcgctgccgaggccggcaacggcgacggcgaccacctcggcggcctcaag
gaactggtgaccgacctgggcgcgatcgacgcgcgcgaggtctcgtcgttcccggtgggc
aacggcatcgtgctgcgggtcggccggtacggcccgtacatcgagcgcggcgagaaggac
tccgagggccatcagcgggcggacgtgcccgaggacctggcgcccgacgagctgagcgtc
gagctcgccgaggagctgctcgccaagccgagcggcgacttcgagctcggcgctgacccg
gcgacgggccaccagatcatcgcccgggacggccgctacggcccgtacgtcaccgaggtg
ctccccgagggcaccccgaagaccggcaagaacgccgtcaagccgcgtacggcctcgctg
ttcaagtcgatgtcgctggacacggtgaccctcgcggacgccctcaagctgatgtcgctg
ccgcgcgtcgtcggcaccgacgccgagggccaggagatcaccgcgcagaacggccgctac
ggcccgtacctgaagaagggcacggactcgcgctcgctcacgtccgaggagcagctcttc
acgatcaccctcgaagaggcgctggcgatctacgcgcagcccaagcagcgcggacgcgcg
gccgccaagccgccgctgaaggagctgggcaccgacccggtcagcgagaagccggtcgtg
gtcaaggacggccgtttcggtccgtacgtgaccgacggggagaccaacgcgacgctgcgc
tccggcgacagcgtcgagacgatcaccccggagcgcggcttcgaactcctcgccgagaag
cgggcgaagggccccgcgaagaagacggcgaagaaggcgcccgccaagaaggccccggcc
aagaaggcgacgaccgccaagaagaccgccgcgaagaagacgacggccgcgaagaagacg
gccgccaagaagacgacggccgccgcgaagaagacgactgccgcgaagacggcctcggac
gactga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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