KEGG T02095: SCATT

Streptomyces cattleya NRRL 8057 = DSM 46488: SCATT_54560

Entry

SCATT_54560 CDS T02095

Definition

DNA polymerase LigD ligase subunit

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

scy Streptomyces cattleya NRRL 8057 = DSM 46488

Pathway

scy03410	Base excision repair
scy03420	Nucleotide excision repair
scy03430	Mismatch repair
scy03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:scy03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:scy03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:scy03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:scy03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C

Other DBs

NCBI-GI:

386359103

NCBI-GeneID:

12652226

UniProt:

G8WVS0

Position

5865934..5866917

AA seq 327 aa
MDAAHHRRPRPDDPVPDRVTPMLAVLSDRRHFDDTWVLERKLDGVRAIGFRDGDTVRLAS
RTGQRLENTYPEIVRALADQPQRAFVVDGEIVALDDGRTSFERLQRRMQLTRPSAALASG
VAVTYFLFDLLHLAGHDTTGLPLRSRKELLREAVRYTGPLRYTEHHTATGDAGQLLDAAC
AQGWEGLIAKRADGRYQQRRSSDWLKLKCLTAQEFVVGGYTEPAGSRAGFGALLLGYHQG
GRLRYAGKVGTGYDTATLRRLRGLLDERGLTEPPFAEPVRERGAHWVRPDLVVQVAFTEW
TRDGRLRAPRYLGLRQDKRPERVVREG

NT seq 984 nt +upstreamnt +downstreamnt
gtggacgccgcacaccaccgcaggccacgaccggacgacccggtgccggaccgggtcacc
ccgatgctcgccgtgctctccgaccgccgccacttcgacgacacctgggtgctggagcgc
aaactcgacggcgtccgggcgatcggcttccgggacggcgacaccgtacgcctggcctcc
cgcaccgggcagcgcctggagaacacctacccggagatcgtgcgggcgctggccgaccag
ccgcagcgggccttcgtggtggacggcgagatcgtggcgctggacgacggacgcaccagc
ttcgaacggctccagcgccgcatgcagctcacccgcccgtccgccgcgctcgccagcggg
gtggccgtcacctacttcctgttcgacctgctgcacctggccggacacgacaccaccggg
ctgccgctgcgctcccgcaaggaactgctgcgcgaggcggtccgctacaccggcccgctg
cgctacaccgaacaccacaccgccaccggtgacgccgggcagctcctggacgccgcctgc
gcccaggggtgggaggggctgatcgccaaacgcgccgacggccgctaccagcagcgccgc
tcctccgactggctcaagctcaaatgcctcaccgcccaggagttcgtcgtcggcggctac
accgagccggccggcagccgcgccggcttcggcgccctgctgctcggctatcaccagggc
ggacggctgcggtacgcgggcaaggtgggcaccgggtacgacaccgcgacgctgcggcgg
ctgcgcgggctgctggacgaacgcgggctgacggagccgccgttcgccgaaccggtccgg
gaacgcggcgcgcactgggtccgccccgacctcgtggtgcaggtggcgttcaccgagtgg
acccgggacggcagactgcgggccccgcgctacctggggttgcggcaggacaagcggccg
gagcgggtggtgcgggaggggtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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