KEGG T00335: Sde

Saccharophagus degradans: Sde_0843

Entry

Sde_0843 CDS T00335

Definition

UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

sde Saccharophagus degradans

Pathway

sde00300	Lysine biosynthesis
sde00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:sde00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:sde00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase tRNA_lig_kinase

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1094855..1096411

AA seq 518 aa
MSDIEITIAQLLQGVWLAEAPLDASVANIKVSGVSLDNRTLSAGSVFIAVPGDKVDGRAF
IEKCDSATAAILAEADTFGVDLTGAVPVVHIPQLKQKISRVAANFYGHPSRSLTIIGITG
TNGKTTCAYLLAQLLSKLQFSCGMVGTLGFAKFDECGAPVNLTDTGLTTPSALDCQKILA
ELQQQVGAVAMEVSSHGLAQGRVADVDFNGAIFTNLSRDHLDYHASLEEYAATKAALFAR
EELSFVVINADDAVGVNILTNGVAPQAITYSYSLGGEQALVAQSENTIVAHSIEWGSSQT
VAQLHTPWGAAELATGLVGRYNLSNVLAVLTTACALGYPLVDVVAQVKTLQAAPGRLQRV
NSSEQPLAVFVDYAHTPDALEKVLSEVAAYTQGKLWVVIGCGGNRDVGKRPLMAEVAERL
ANCVVLTSDNPRDENPELILKDMLAGLKNKDAAMVIADRKNAIEYAVANAAENDAIVIAG
KGHENYQLVKGEKLPFDDALIAKEFLAAKCFSHARGQA

NT seq 1557 nt +upstreamnt +downstreamnt
atgagtgatattgaaatcactattgcgcaattacttcagggtgtttggctggccgaggcg
ccgctagatgcgagcgttgccaacataaaagtaagtggggtgtctttagataaccgtact
ttaagcgctggcagcgtatttattgctgtacctggcgacaaagtagatggacgcgctttt
attgaaaaatgtgacagtgcaaccgctgcaatattggcagaggcagatacgttcggtgtc
gacttaactggtgctgtacctgtggtacatattccacagttaaaacaaaaaataagtcgg
gtggcggctaatttttatggtcacccttcgcgctctttaacaattattggcattactggt
actaacggtaaaaccacatgtgcctatttgctcgcgcaattgttaagcaaattacaattt
tcgtgcggcatggtgggcacgctaggtttcgcaaagtttgatgaatgcggtgcacccgtt
aatttgactgatacaggcttaactacaccttctgcgctagattgccaaaaaattctagct
gaactacagcagcaggtaggtgcagtggcaatggaagtgtcttctcacggcttggcgcaa
gggcgcgtggcagacgtggattttaatggcgcaatttttaccaatttaagtcgcgaccat
ttggattaccacgcaagcctcgaagaatatgctgccaccaaagctgcgttatttgcgcga
gaagagttgagctttgtagtaatcaatgccgatgacgcagtgggtgtgaatattttaact
aatggcgtggcgccgcaagccatcacttatagctacagtcttggcggtgagcaagctttg
gttgctcaaagtgaaaacacaattgttgctcactctattgaatggggttctagccaaacc
gtcgcgcagttgcatacaccttggggtgcagctgaattagcaacagggctagttggccga
tataacttaagcaacgtgttggctgtacttacaacagcttgtgcattgggttatccattg
gtggacgtggtcgcacaggtgaagactctgcaagccgcgccgggtcgactgcagcgtgta
aatagcagtgagcagccattggcggtatttgtagattacgcgcacacgcccgacgcactt
gaaaaagtacttagcgaagtggccgcatatacgcaaggtaagttgtgggtagtgataggt
tgtggtggtaatcgcgatgtaggtaaacgtccattaatggcagaagtggcagagcgttta
gctaattgcgtggtattaacatctgataacccgcgcgatgagaacccagagcttatttta
aaagatatgcttgctggccttaaaaacaaagatgcggcgatggttattgctgatcgaaaa
aacgcaatcgaatacgccgtcgcaaatgcagccgaaaacgatgcgattgttattgcgggt
aaaggccacgaaaattaccagcttgtcaaaggagaaaaactaccgtttgacgatgcatta
atagctaaagaatttttagcagccaaatgcttttcgcatgcgcgaggtcaagcgtaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SDE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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