KEGG T00335: Sde

Saccharophagus degradans: Sde_2106

Entry

Sde_2106 CDS T00335

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

sde Saccharophagus degradans

Pathway

sde00020	Citrate cycle (TCA cycle)
sde00310	Lysine degradation
sde00380	Tryptophan metabolism
sde01100	Metabolic pathways
sde01110	Biosynthesis of secondary metabolites
sde01120	Microbial metabolism in diverse environments

Module

sde_M00009	Citrate cycle (TCA cycle, Krebs cycle)
sde_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:sde00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:sde00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:sde00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(2690725..2693586)

AA seq 953 aa
MPCHTVGEMQESIMELLWKTSHLSGGNAAYVEDQYESYLSDPHSVSEEWRDYFDKLPRVN
GSASEDVNHSEIIKYFELLGKNRARPIIVPGAGSGDIAHERKQVEVVQLVNAYRLSGHQK
ANIDPLNLRAVKNPVDLDLGFHRLNTADLDSVFQTGDLAFGYKEAKLKDIIADLEKTYCG
NIGAEVMHITNYEERRWLLNRLERSRSQPDFGPKAKRNILRRLTAAEGLERHLDSKYPGT
KRFGLEGGESFIPLLDALIRRVGEYGAKEMVLGMAHRGRLNALVNILGKNPSDLFDEFEG
KKLVDTSGDVKYHQGFSSNVMTPGGEMHLALAFNPSHLEIVSPVVEGSVRARQDRRGDKD
GHTVVPVVVHGDAAFAGQGVVMETFQMSQTRAYKTGGTVHLVINNQVGFTTSRADDARST
AYCTDVAKMIETPIFHVNGDDPEAVVYVTQLAADYRNEFKKDVVIDLVCYRRRGHNETDE
PSSTQPLMYKAIRSHKTTRTVYAEQLVNAGVVTQDEADQMTNDYRAALDRGEHVARGLVS
EPDSSLFVNWSPYIGHDWNTPADTTYPIKELQSLAEQTSHVPDGVQVQRQVAKIYDDRRK
MAGGALPINWGMAETLAYATLLKEGHKIRLTGQDVGRGTFSHRHAVVHNQKTGEAYIPLA
NISEDQAPLDIYDSLLSEEAVLAFEYGYATTSPKGLVIWEAQFGDFANGAQVVIDQFITS
GEHKWQRLCGLTMLLPHGYEGQGPEHSSARLERFMQLCAEHNIQVCIPTTPAQVYHMIRR
QAIRPMRRPLVVMSPKWILRHKLATSTLEELAEGSFKTVIGDDVVKPEEAKRVILCSGKV
YYHLFEAREEREEKDVALIRIEQLYPFPEEALRVELAKYPGLVDVVWCQEEPQNQGAWYS
SQHRMRRVVERVNEDAELRYVGRASSSAPAAGYMSTHLEEQNKFINAALDTSV

NT seq 2862 nt +upstreamnt +downstreamnt
atgccctgtcatacggtgggcgaaatgcaagaaagtatcatggagttattgtggaaaacc
tcgcatctatctggaggtaacgccgcatatgtagaagatcagtacgaatcctatctgtca
gaccctcattccgtttcggaagagtggcgcgactacttcgataagttaccccgtgttaac
ggcagcgctagcgaagatgtaaaccattccgaaatcattaagtatttcgagctgctcggt
aaaaaccgcgcgcgtccaataattgtgcccggtgctggtagtggcgatattgcccacgag
cgcaagcaggtagaagttgttcagttggtaaatgcctaccgcttaagcggtcatcaaaaa
gccaatatcgatccgctaaatctacgcgcagttaaaaaccctgttgatttagacttgggc
tttcaccgcttgaatacagccgatttagattctgtattccaaaccggtgacctcgcattt
ggctacaaagaagccaagctgaaagacatcattgcagacctagaaaaaacttactgcggc
aacattggcgcagaagttatgcacattactaactacgaagagcgtcgctggttgttaaac
cgcttagagcgttcgcgttctcagccagatttcggccctaaagctaagcgcaatatcttg
cgtcgtttgactgcagccgaaggcttagagcgtcatttagatagcaaatacccaggtaca
aagcgctttggtttggaagggggcgaaagcttcattccattgcttgatgcgttaattcgt
cgtgttggcgaatacggtgccaaagaaatggtattgggtatggctcaccgtggccgctta
aatgcgctggtgaacattcttggtaaaaacccatctgatttgtttgatgagtttgaaggt
aagaagctagtagatacctctggtgacgttaagtatcaccaaggtttctcgtcaaacgta
atgactcctggtggcgaaatgcaccttgcgttggcgtttaacccatctcacttggaaatt
gtatctccagtggttgaggggtctgtacgtgcacgtcaagatcgccgcggcgacaaagac
ggccacaccgtagtgcctgttgtagtacatggtgatgctgcgtttgctggtcagggcgtt
gtgatggaaacattccaaatgtcacaaacccgcgcatacaaaactggcggtactgtgcac
ttggtaattaacaaccaagtaggtttcactactagccgtgcagacgacgcacgctctaca
gcttactgtaccgacgtggcaaaaatgatcgaaacaccgatcttccacgttaacggtgac
gacccagaagcggttgtttacgttactcaattggcagcagattaccgcaacgaatttaag
aaagatgtggttattgatttggtttgttatcgccgtcgtggccacaacgaaaccgatgag
ccttcatctactcagccgttaatgtacaaggctattcgttcgcacaaaactactcgcact
gtgtatgcagagcagcttgttaacgctggtgtggttactcaagacgaagcggaccagatg
actaacgattatcgtgctgctttggatagaggcgagcacgtagcgcgtggtttggtaagc
gagccggattcttcgctgtttgtaaactggtcgccttatattggtcacgactggaataca
cctgcagatactacgtatccaatcaaagaattgcagtcgttggcagagcaaactagccat
gtgccagatggtgttcaggtacagcgtcaggtagcgaaaatctacgacgaccgtcgcaaa
atggcgggcggtgccttgccaattaactggggcatggccgaaactctggcttacgctacc
ttgttgaaagaaggccataaaattcgtttaacggggcaagatgttggtcgtggtactttc
tcgcatcgccatgctgttgtgcataaccaaaaaactggtgaagcttacattccgttagcg
aatatttcagaagatcaagcgccgttagatatttacgattcgttattatctgaagaagcg
gtgctggcgttcgaatacggttacgcgactacttcgccaaaaggtttggttatttgggag
gctcagttcggtgatttcgccaacggcgctcaagttgttattgaccaatttattacaagt
ggcgagcacaagtggcagcgtttgtgtggcttaactatgctattgccacatggttacgaa
gggcaggggccagagcactcttcagcacgtttagagcgctttatgcaattgtgtgcagag
cacaacattcaagtgtgtatccctaccacgcctgcgcaggtttatcacatgatccgccgt
caggctattcgcccaatgcgcagaccacttgttgtgatgagcccgaaatggattcttcgt
cacaagttggcaacgtctacgttagaagagctagctgaaggtagctttaaaacagtaatt
ggcgatgacgttgttaagccagaagaagccaaacgtgtaattttgtgtagcggtaaggtt
tattaccatcttttcgaggctcgcgaagagcgtgaagagaaagacgttgcattaattcgc
attgagcaactttacccattccccgaagaggcgctgcgcgttgagctagcaaaataccct
ggtttggtggatgtagtgtggtgtcaggaagagccgcaaaaccaaggcgcttggtactct
agccagcaccgcatgcgcagagttgtagaacgagttaacgaagacgcagagttgcgttac
gttggtcgggcatcttcttctgcacctgcagcgggttacatgagcacccacttggaagaa
cagaataagttcatcaacgcggcattggacacttccgtttaa

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SDE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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