KEGG T00335: Sde

Saccharophagus degradans: Sde_2935

Entry

Sde_2935 CDS T00335

Definition

beta-galactosidase

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

sde Saccharophagus degradans

Pathway

sde00052	Galactose metabolism
sde00511	Other glycan degradation
sde00600	Sphingolipid metabolism
sde01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:sde00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:sde00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:sde00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_C Glyco_hydro_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3727209..3729023)

AA seq 604 aa
MDASNNKTGVAIATLTETAVAVPAQKNVTVTANATINNPKLWGPLPTQKPQRYLAVSQIM
QAGIVVDNYQTTFGIRDIAFDPERGVVVNGEPVYIQGVNQHHDLGALGAAFNVRAAERQL
ELLQEMGVNAIRMAHNPPAKELLDLTDKMGFLVIDEIFDSWERKKTPLDFHLIFPEWSEP
DVRNFIRRDRNHPSVIGWSLGNEVGEQYTGEAGAAVAKRLHDIAKSEDPTRPTSVSINFA
KPGMALPPVMDMINLNYQGEGIRNAPEYVHLKGIRTAPLYPKFREAYPNKVIISSENAAA
VSSRGEYFFPVTAGASAPVADGAGGDPNSAHVSAYELYTAPFGSSADKVLGSLADHPYVA
GGFVWSGWDYLGEPTPYYSARSSYFGVIDLAGFKKDRFYLYQAHWRPDLPMAHILPHWNW
PNRVGEVTPVHVFTSGDEAELFLNGKSLGRKIKGKNAFRIRWDNVIYQPGTLKVVAYKNG
KQWAQSVVATTGSASQLQLTGDRTRIRADGKDLAFITVDVQDADATNVPTADNPLSFTLA
GPGEIVATDNGDPTDLTSFTSHTRNAFNGKCLVIVRGVAGKPGALTLNVTGAGLKAAQTV
ITTH

NT seq 1815 nt +upstreamnt +downstreamnt
ttggatgcatccaataataaaaccggtgtagccattgctacgttaaccgaaaccgccgtt
gccgtaccagcgcaaaaaaatgtaacggtaacggctaacgctacaataaataacccaaag
ctttggggcccgttacccacgcaaaaaccgcagcggtatttggccgtatcgcaaataatg
caagcgggtattgttgtagataattaccaaaccactttcggcatacgcgatatagcgttt
gaccccgagcgcggcgtggtggttaacggtgagcctgtttatattcaaggggtaaatcaa
catcacgacttaggtgcgttgggcgcagcatttaatgtgcgtgcagcggagcgccaatta
gagttattgcaggagatgggcgtaaatgccattcgtatggcgcacaacccgccagcgaaa
gagttgctagacctaacagacaaaatgggctttttagttatcgacgaaatattcgactct
tgggagcgcaaaaaaacaccgctcgactttcaccttatatttcccgaatggtcggaacca
gatgtgcgaaattttattcgccgcgatcgcaaccacccatcggtaataggctggagccta
ggcaacgaagtaggcgagcaatataccggcgaagctggcgcagcagttgcaaaacgactg
catgatattgcaaaaagtgaagacccaactcgacccacttcggtttctattaattttgcc
aagccgggtatggcgttgccgccggttatggatatgatcaatttgaattatcaaggcgaa
ggtattcgcaatgcacctgaatacgtgcacttaaaaggtattcgcaccgcgccgctttac
cccaagtttcgcgaggcttatccaaataaagtaataataagtagcgagaacgcggccgca
gtaagttcgcggggggaatacttttttccggtaaccgcaggtgcaagtgcaccagtagca
gatggtgccggtggtgaccctaattctgcgcacgtaagcgcctacgagctgtataccgcg
ccgtttggttcttctgccgataaagtgctgggttcccttgctgatcacccttatgtggct
ggaggttttgtgtggagcggttgggattatttgggcgaacccaccccttactattccgcg
cgcagctcgtattttggtgtaattgatttggcggggtttaaaaaagatcggttttatttg
taccaagcgcactggcgaccagatttacccatggcccatattctgcctcactggaattgg
cccaatcgagttggcgaagtaacacctgtgcatgtatttacatctggggatgaagctgaa
ttattcctaaacggtaaatcgctaggtagaaaaataaaaggcaaaaatgcatttcgcatc
cgttgggacaacgttatttatcagcccggcacattaaaagtggtggcctataaaaatggt
aagcaatgggcgcaatctgttgttgccactactggcagtgctagccaattacagttaacc
ggagatagaaccagaattcgagcggatggcaaagacctcgcgtttataaccgtagatgtg
caagatgccgatgccacaaacgtgcccactgccgataatccattaagctttaccctagct
ggccctggggaaattgtggccacggataacggtgacccgacggatttaacgtcttttact
tcgcatacccgcaatgcttttaacggtaagtgtttggttattgttcgtggtgttgcgggt
aagccgggtgcgcttaccttaaatgttacgggggcagggctaaaagctgcacaaacggta
ataacaactcattaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SDE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (31)   

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