KEGG   Saccharophagus degradans: Sde_3681Help
Entry
Sde_3681          CDS       T00335                                 

Definition
DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase (EC:4.2.99.18 3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sde  Saccharophagus degradans
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:sde00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Sde_3681
Enzymes [BR:sde01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Sde_3681
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Sde_3681
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
4664020..4664835
Genome map
AA seq 271 aa AA seqDB search
MPELPEVETTRRGILPHLEGKRVKAVSVRNRSLRWPIPADLAQQIQNKTLRTIHRRGKYL
LLEFANGHVIWHLGMSGSLRIIKADEPPMVHDHVDIAFGGNLALRYTDPRRFGAVLWTNE
AILEHKLLNHLGPEPLTDAFNSAYLFDKSRKRSQSVKTWIMDSKVVVGVGNIYANEALFN
SAIHPLKAAGKLSQKQCDIFCSEIKSVLAKAIEQGGTTLRDFVGGDGKPGYFAQELNVYG
RGGKACKKCRKPLTEKKLGQRTTVYCTHCQK
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgccagagttacccgaagtagaaaccacccgccgcggtatactcccccacctagaaggc
aaacgcgttaaagccgttagcgtgcgcaatcgctccctgcgctggcccatcccagcagac
ctagcccaacaaattcaaaacaaaaccctgcgcactattcaccggcgcggtaaataccta
ctgcttgagtttgccaatgggcacgttatttggcacttggggatgtctggcagtttacgc
attattaaggccgacgaaccacccatggtacacgaccacgtggatatagcatttggcggt
aacctcgccctgcgctacacagatccgcgccgatttggcgccgtattatggacaaacgaa
gccattctcgagcacaagctactcaaccacctcgggccagaaccactaaccgacgcattc
aacagcgcctacctgttcgataaaagccgcaagcgcagccaaagtgttaaaacgtggatt
atggacagcaaggtagtggttggggtgggcaacatttacgctaacgaagctttatttaac
tctgctattcacccactaaaagccgcgggtaaactcagccaaaagcagtgcgatattttt
tgtagcgaaattaaaagcgtgcttgccaaagccatagaacaaggcggtacaacgctaaga
gactttgtaggcggagatggtaaaccgggttattttgcgcaggaactaaacgtatacggc
cgtgggggcaaggcctgtaagaaatgccgcaaacctcttacagaaaaaaaactagggcag
cgcaccaccgtgtactgcacccattgccaaaaataa

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