KEGG   Sulfurospirillum deleyianum: Sdel_0600
Entry
Sdel_0600         CDS       T01126                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
sdl  Sulfurospirillum deleyianum
Pathway
sdl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sdl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Sdel_0600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdl03019]
    Sdel_0600
   03016 Transfer RNA biogenesis [BR:sdl03016]
    Sdel_0600
Enzymes [BR:sdl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     Sdel_0600
Messenger RNA biogenesis [BR:sdl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Sdel_0600
Transfer RNA biogenesis [BR:sdl03016]
 Prokaryotic type
  tRNA degradation factors
   Sdel_0600
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 YfmQ
Other DBs
NCBI-ProteinID: ACZ11636
UniProt: D1B019
Position
585959..588199
AA seq 746 aa
MEYKIYVNNQEEIYDIGKVAKQAAGAALLKIKNTVILATVARDDTQVSENFVPLTVQYVE
KSYAVGKIPGGYIKRETKPGDFETLTSRIIDRSLRPLFPKGYAYPTQITVFVLSCDAEVD
LQVAALNAAGAALYLSDIPVNKAVAGVRIGYVDGAYVVNPSNSLLKKSTLDLYVAGTKEE
LLMIEMRSIASMESVSLPVMAIDPMLDPTLAENMMAKQVINEFPEDAILAAIDTAQNAIT
EATTAYENTFVSLKKEDAILDYKQDLTSDAIFAYIDEFYKEAVYDAINQMAKSERASELS
KIVDAILKDNIATLEGWDKALVDSVLQTYKKKIVREMIVEKRVRADGRKLTEIRPISIET
NLLPLAHGSCLFTRGQTQALVIATLGNDKDAQMYDLLTEKSSVSDTFMVNYNFPGFSVGE
ASPLRAPGRRELGHGNLARRALEPVVDINRLQTIRLVSEILESNGSSSMATICGGALALK
AAGVEIEKLVAGIAMGLVFEGDKHAVLSDIMGLEDHDGDMDFKVAGTKDGITALQMDIKL
GGISRDVLKEALYQAREGREHILAIMEKASEEIVINNAVLPKLELFNVDPSKIVDIIGQA
GKTIREIIEKFEVSIDLDREKGEVKIAGENKEKVDAAKEHIIQITNKASFGGRGGHGRDR
DNKYPTKESKPVPTFIQDEVVDGTVKRIVDFGAFVELPGGIDGLLHVSKIADHRVDKVSD
YLALEQKVRVKILKQAGNKIELELVR
NT seq 2241 nt   +upstreamnt  +downstreamnt
gtggaatataaaatttatgtgaacaatcaagaagagatttatgatataggcaaagttgcc
aaacaagcagcgggtgctgctttattgaaaattaaaaatacggttatcctagcgaccgtt
gcacgtgatgatacgcaagtctctgaaaattttgtgcctttgacggttcaatatgtcgaa
aaaagttatgctgtaggtaaaattcctggcggatatattaaacgagagacaaaaccaggt
gattttgaaacactaacctcccgtattattgatagaagtttacgtccacttttcccaaaa
gggtatgcgtacccaacacaaattaccgtttttgttttaagttgtgatgctgaagttgat
cttcaagttgcagcactaaacgcagcaggtgctgcattgtacctttcagatatccctgta
aataaagcagttgcaggtgttcgtattggttatgttgatggagcgtacgtggtgaatcca
tctaattctctcctcaaaaaaagtacgttggatttatatgtggctggaacaaaagaagag
ttgttaatgattgaaatgcgctctattgcttctatggaaagtgttagcctacctgttatg
gcaattgacccgatgttagatccgactttagcagaaaatatgatggctaagcaagtcatc
aatgaatttcctgaagatgcaattttagctgcgattgatacagcacaaaatgctattact
gaagcgacaacggcgtatgagaacacatttgtttccttgaaaaaagaggacgccattctt
gattataaacaagatttgaccagtgatgcgatttttgcttatattgatgagttttacaaa
gaggctgtttatgacgctatcaatcaaatggcaaaaagcgagcgagcgagtgaattaagt
aagattgtagatgcgattttaaaagacaatattgctacgctcgaaggttgggataaggca
cttgttgatagcgttcttcaaacgtataaaaagaagattgtgcgtgagatgattgttgaa
aaaagagtacgtgcggatggaagaaaattaacagaaattagacctattagcattgaaaca
aatctgttgcctcttgcgcatggttcatgtctttttacacgaggtcagacacaagcattg
gttatcgcaacattaggtaatgacaaagatgcacaaatgtacgacttattaaccgaaaaa
agtagtgtaagcgatacttttatggtcaattataacttcccaggcttttcagtaggagaa
gcttctcctttacgtgcgccaggacgtagagaattaggtcatggtaatcttgcacgacgt
gctttagaacccgttgtggatatcaacagactacaaacaattcgtttagtctctgaaatt
ttagaatccaatggatcttcttctatggcaacgatttgtggaggagcacttgctttaaaa
gcagcaggtgttgaaattgaaaaattggttgcaggtattgcaatgggactggtttttgaa
ggggataaacacgctgttttaagtgatatcatgggattagaagatcatgatggtgatatg
gattttaaagtggctggaacaaaagatggtattacggcacttcaaatggacattaaattg
ggtggaatttctagggatgttttaaaagaggcactttatcaagcaagagaaggacgtgaa
catatccttgcaattatggaaaaagcaagtgaagaaatagttattaacaatgccgtactt
cctaaattagagctgtttaatgttgatccttctaaaatcgtagatattatagggcaagcg
ggaaaaaccattagagaaattattgaaaaatttgaagtttcgattgatttggatcgtgaa
aaaggtgaagttaaaattgcgggagaaaataaagaaaaagtggatgccgcaaaagagcac
attattcagattacgaacaaagcctcttttggtggtcgtggtggacatggtcgagataga
gacaataagtatcctacaaaagagagtaaaccagtgccaacatttattcaagatgaagtt
gtggatggtaccgtaaaacgtattgtagattttggtgcttttgttgaattgcctggcggt
attgatggtcttttacatgtttcaaaaattgcggatcatcgtgttgataaagtcagtgat
tatctcgcattagagcaaaaagtacgtgtaaaaattttaaagcaagcaggaaataaaata
gaactagagcttgtacgctag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

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