KEGG   Sulfurospirillum deleyianum: Sdel_0632
Entry
Sdel_0632         CDS       T01126                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
sdl  Sulfurospirillum deleyianum
Pathway
sdl03030  DNA replication
sdl03430  Mismatch repair
sdl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sdl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Sdel_0632
   03430 Mismatch repair
    Sdel_0632
   03440 Homologous recombination
    Sdel_0632
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sdl03032]
    Sdel_0632
   03400 DNA repair and recombination proteins [BR:sdl03400]
    Sdel_0632
Enzymes [BR:sdl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Sdel_0632
DNA replication proteins [BR:sdl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Sdel_0632
DNA repair and recombination proteins [BR:sdl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Sdel_0632
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DUF655
Other DBs
NCBI-ProteinID: ACZ11668
UniProt: D1B051
Position
624249..627797
AA seq 1182 aa
MSELHYTHLHLHTEYSLLDGANKIGKLAKKLKAQGVGSVAITDHGNMFGALDFYKTMRKE
GIKPIIGIEAYIHNQDDIGDKTTKQRFHLCLFAKNEIGYKNLMYLSSMSYIKGFYYYPRI
NKQLLKEHSEGLICSSACLQGEVNWHLNLNNKRNVQFGAKGYERAKEVALEYKAIFGDDF
YLEIMRHGINDQMFIDDNILRIAKETGIKVIATNDTHYLEPDDAEAHEAFMCIAMNKEFD
DPNRLRHSVHEFFVKSPEQIADLFVDIPEVLENTQEIVDKCNLEIKLGDPTPPKFKFTKE
YAAREGLSFESDDDFFAHKCREGLKERLKYVDASKHEEYKARLEREISVICTMKFPGYML
IVWDFIREAKSRGVPVGPGRGSAAGSLVAYSLFITDLDPMPYNLLFERFLNPERISMPDI
DVDFCQSRRGEIIDYVVEKYGRYNVAQVITFGKLLAKGVIRDVARVLAIPYAEADAMAKL
IPDELGITLNGIGVEGEEGFKAGAYQKEPKLRELIERDPRMQRVWKFALALEGLNRNSGM
HAAGVVISDEELWHKTPLYQPSGEDHLVTQYSLNFLEDVDLIKFDFLGLKTLTVIDNALK
LIKARYNKTIDFNALDLNDPKVYELIQSGDTIGLFQIESSGMQSLNERLKPNTFEDLIAV
LALYRPGPMESGMLDDFIDRKHGRKEVTYFFDEFTKPLQPILEPTYGVIVYQEQVMQIVQ
SIGGFSLGESDLIRRAMGKKKIDYMKQKAEEFADGAVKQGLDRAHAIELFGLIEKFAGYG
FNKSHSAAYALITFQTAYLKCYYPQEFMAALLTSEQDNTDKIVKYIDEVKRLGIKLLPPS
IQHSLIEFSAITDSDGCEAILFGMGAIKGVGNAAISKILEARADAPFSDMSDFISRIDGS
KVNKKVLESLIKSGSFDGFGYSRRALLESIDTIIEASGECSRAKKMAEYSLFGDSEEMTS
VAVKIEPISEFDSKRMLELEKETIGFYISGHPLDAFRAQIDEMNYMLSSEKDQIEDGSKA
LFIGKVESITEKMSKKGNKFGVVSLMDFHGSMELTVFEKQLEALSKMDLERPLCFKVDVT
NDGQSLKMRVMKIMEIEEAKKEKIETKVIEAPLEPKVLKLRLSEDVTTLEMVYQLARQHA
GRRALKLLITSKLQDVLIETSLSVDDSLDEKLAALEWVEVVE
NT seq 3549 nt   +upstreamnt  +downstreamnt
atgagcgaattacactatacccatttacatttacataccgaatactccttgcttgatggt
gccaataaaataggcaaactagcgaaaaaactgaaagcccaaggggttggctctgttgcg
attaccgaccatggcaatatgtttggcgctcttgatttttacaaaaccatgcgaaaagag
gggataaaacctattattggcattgaggcgtacattcataaccaagacgatattggcgat
aaaacgaccaaacaacgctttcacctctgcttatttgctaaaaatgagattggctataaa
aatttaatgtacctctcttcgatgagctacattaaaggattttattactatccacgtatt
aacaaacagctcttaaaagagcattcagaaggtttgatttgctcgagtgcgtgtttgcaa
ggtgaagtgaattggcatctcaatctcaataacaaacgtaatgttcaatttggtgccaaa
gggtatgaaagggctaaagaggttgctttggagtacaaggcgatttttggggatgatttt
tatttggaaattatgcgccatggcattaatgatcagatgtttattgatgataatattttg
cgcattgccaaagagacaggcattaaagtgattgcgaccaatgacacgcactacttagag
cctgatgatgcagaagcgcacgaggcgtttatgtgtattgcgatgaacaaagagtttgat
gacccaaatcgtcttcgtcactctgtccatgagttttttgtcaaatcccccgagcagata
gccgatctttttgtggatattcctgaagtgcttgaaaatacacaagagattgtggataaa
tgtaatttggagattaaactaggtgatccaacccctccaaaatttaaatttaccaaagag
tatgccgctcgtgagggactctcttttgagagtgatgatgacttttttgcgcacaaatgc
cgtgagggtttaaaagagcgtttaaaatacgtcgatgcaagtaagcatgaagagtacaag
gcaaggcttgagcgggagattagcgttatttgcactatgaaattccctggttatatgctt
attgtttgggattttattcgtgaagccaaaagcagaggtgttcccgtaggtcctggtagg
ggttctgcggcggggagtttggtcgcatattcgctttttattaccgatcttgatccgatg
ccttataacttgctttttgaaaggtttttaaatcctgaacgtattagtatgcccgatatt
gacgtggatttttgtcagagcaggcggggtgagattattgattatgtcgtagaaaagtat
gggcgttataacgtggcacaagtgattacctttggtaagcttttagccaaaggagttatt
cgtgatgtcgcccgtgttttagcgattccttacgctgaagccgatgccatggcaaagctc
attcctgatgagctgggcattaccttaaatggaataggagttgagggcgaagaggggttt
aaagcaggagcctatcaaaaagagcccaagcttagagaactcattgagcgtgaccctagg
atgcagcgagtctggaaatttgccttagctcttgaaggactgaaccgaaactcaggtatg
catgccgcaggtgtggtaattagcgatgaagagttgtggcataaaacaccactctatcaa
ccctcaggtgaagatcatttggtcacccagtattcgctcaactttttggaagatgtggat
ttgattaagttcgactttttgggacttaaaacactgacggtgattgataatgcgctcaaa
ctcattaaagcacgctataacaaaaccattgattttaacgcactggatttgaatgatcct
aaagtgtatgaactgattcaaagtggtgataccatcgggcttttccagatagaatccagc
ggtatgcaatcgttaaatgagcgtttaaagcccaacacctttgaagatttaattgcggtc
ttagcactgtatcgtccagggcctatggaatcaggtatgttggatgattttattgacaga
aagcacgggcgtaaagaggttacttacttttttgatgagtttaccaaacctttacagcct
attttagaaccaacctatggggtgattgtctatcaagaacaggttatgcaaattgttcaa
agcattggtggatttagtttgggtgaatcagacttgattcgtcgtgcgatgggtaagaaa
aagattgattatatgaaacaaaaagccgaagagtttgccgatggtgcggtgaagcaaggc
ttagatagagcccatgcgattgagctttttggcttgattgaaaagtttgcagggtatggt
tttaataaatcgcactctgccgcttacgcactgattacctttcaaacggcgtacttgaaa
tgctactatcctcaagagtttatggcagcgcttttgacctcagagcaagacaataccgat
aaaatcgttaaatacattgatgaggtgaagcgtttaggcattaaacttcttcctccttca
atccaacattcactcattgaatttagcgctattacggatagtgatgggtgtgaagcgatt
ttgtttgggatgggggcgattaaaggggttggcaatgcggcgattagtaaaattttagaa
gccagagccgatgctcctttctctgatatgagcgattttatctctcgtattgatggctca
aaagtcaataaaaaagttttagaatcgctgattaaatcaggaagttttgatggttttgga
tacagcagacgagctttgttagagagcattgataccattattgaagccagtggagagtgt
tctagggctaaaaagatggcagagtattcgctttttggtgacagcgaagagatgaccagt
gtggcggtcaaaattgagccgattagtgaatttgatagcaaacgtatgttggaacttgaa
aaagagaccattgggttttatatttcaggacatcctttggatgcatttagggctcagatt
gatgagatgaattatatgctctccagcgagaaagaccaaattgaggatggttcaaaagcg
ctttttattggaaaagtggagagcattacagagaagatgagtaaaaaagggaacaagttt
ggtgtggtttctctgatggattttcatggttctatggagctgactgtctttgaaaaacag
cttgaagcgctctccaaaatggatttagagcgacccctttgttttaaagtggatgttacc
aatgatggacagagccttaagatgcgtgtgatgaaaatcatggagatagaagaggctaaa
aaagagaaaattgaaaccaaagtcatcgaagcgcctttggagccaaaggttttaaaatta
cgattgagtgaagatgtgacgaccttagaaatggtttatcaattagcaaggcaacatgct
ggaagaagggcgctaaaacttttgattacctcaaaattacaagatgttttgattgaaaca
tcgttgagtgtggatgatagtctggatgagaaattagccgcattagagtgggtagaagtg
gttgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (33)   

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