KEGG   Shewanella denitrificans: Sden_0015Help
Entry
Sden_0015         CDS       T00344                                 

Gene name
fadB
Definition
multifunctional fatty acid oxidation complex subunit alpha (EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8)
Orthology
K01825  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
sdn  Shewanella denitrificans
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:sdn00001]
 Metabolism
  Overview
   01200 Carbon metabolism
    Sden_0015 (fadB)
   01212 Fatty acid metabolism
    Sden_0015 (fadB)
  Carbohydrate metabolism
   00640 Propanoate metabolism
    Sden_0015 (fadB)
   00650 Butanoate metabolism
    Sden_0015 (fadB)
  Lipid metabolism
   00071 Fatty acid degradation
    Sden_0015 (fadB)
   01040 Biosynthesis of unsaturated fatty acids
    Sden_0015 (fadB)
  Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    Sden_0015 (fadB)
   00310 Lysine degradation
    Sden_0015 (fadB)
   00380 Tryptophan metabolism
    Sden_0015 (fadB)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    Sden_0015 (fadB)
  Metabolism of terpenoids and polyketides
   00903 Limonene and pinene degradation
    Sden_0015 (fadB)
   00281 Geraniol degradation
    Sden_0015 (fadB)
  Xenobiotics biodegradation and metabolism
   00930 Caprolactam degradation
    Sden_0015 (fadB)
Enzymes [BR:sdn01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     Sden_0015 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     Sden_0015 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     Sden_0015 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  dodecenoyl-CoA isomerase
     Sden_0015 (fadB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(20924..23074)
Genome map
AA seq 716 aa AA seqDB search
MIYQSPTIQVELLEDNIAKLCFNAPGSVNKFDRETLASLDAALDSIKQNASIQALVLTSA
KSTFIVGADITEFLGLFKQDDATLLTWVEQANAVFNKLEDLPFPTISAINGFALGGGCET
ILATDFRVADTNARIGLPETKLGLIPGFGGTVRLPRVIGADNALEWITTGKEQRPDDALQ
VGAIDAVVEPENLLAAALQMLKDALAEKLDWQARRKRKQSPLALPKLEAMMSFTTAKGMV
YAVAGKHYPAPMAAVSVVEQAATLDRAGALKVENLAFIKLAKTEVATALIGIFLNDQFVK
GKAKKAGKLAKDVNSAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALELGLNEAAKIL
ATQVARGRSTPEKMAKVLNNITPSLDYAAIKHSDIVVEAVVEHPKVKATVLAEVEDYVAE
DAIIASNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEIIRGEHSSEETIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLADGADFAAVDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKNGTDAIDIMFENKRLGQKNSKGFYAYSVDRRGKP
KKDIDATSYQLLGAAFGELKAFEADDIIARCMIPMIIETVRCLEEGIIASPAEGDMGLVY
GLGFPPFRGGVFRYIDTMGVANFVALADKYAHLGGLYQVTDAMRELAANNGSYYQA
NT seq 2151 nt NT seq  +upstreamnt  +downstreamnt
atgatctaccaaagccccacaattcaggttgagttacttgaagataatattgccaagctg
tgctttaacgcacctggctcggttaacaaattcgacagagaaactcttgcctcgctagac
gctgcattagacagcatcaaacagaacgctagcatacaagcgctggtgttaacctcagca
aaaagcacctttatcgtgggtgcggacatcaccgaatttttaggtctatttaagcaagat
gatgccaccttgctcacttgggttgaacaagcaaatgccgtgttcaataaattagaagac
ctgccgttcccgactatctccgccatcaatggttttgctctgggtggcggttgtgaaacc
attttagccacagacttccgtgttgctgataccaatgcgcgcatcggtctgcctgaaacc
aaactgggactcattcctggatttggcggcacagtgcgcttacctcgcgttattggtgct
gacaacgcgctagagtggatcaccacaggtaaagaacaacgcccagatgatgccctgcaa
gtgggtgccatcgatgcggttgttgaaccagaaaacttattagccgctgcgctacaaatg
cttaaagatgccctagctgaaaagctagactggcaagcacgccgtaagcgtaagcaatca
ccattagcactgccaaaacttgaagccatgatgtccttcaccacggcaaaaggcatggtg
tatgccgttgctggtaaacattatccggcgcctatggctgctgtcagtgttgtagaacaa
gcggcaacgttagacagagccggtgcattaaaagttgaaaacctcgccttcatcaagctc
gctaaaaccgaagtagctacggctttaatcggtattttcttaaacgatcaattcgttaaa
ggcaaagctaagaaagccggcaagctagcaaaagacgttaatagtgctgcggtattgggt
gcaggtatcatgggcggcggtatcgcttaccagagcgccagcaaaggcacaccaatagta
atgaaagacattgcccagccagccctagaattaggtttgaatgaagccgctaagatttta
gccacccaagtggctcgtggtcgttcaacaccagaaaaaatggccaaggtacttaacaac
attactccatcattggactacgctgccattaagcatagcgacattgtggttgaagcagta
gttgagcatccaaaagtgaaggctacagtactggcagaagttgaagattatgtcgcagaa
gatgccatcatcgcctctaacacttcgacgatttctatcaatttattagccaaaagcctt
aagaagcctgaacgcttctgcggcatgcacttctttaacccagtgcataaaatgccatta
gttgaaatcatccgtggtgagcacagctcagaagagaccatcgcctctgttgtggcctat
gccagcaaaatgggcaagacgccaatcgtcgttaacgattgtccaggcttcttcgttaac
cgcgtgttattcccctactttgctggtttcaatggtctgcttgccgatggcgctgacttt
gccgctgtcgataaagtcatggaaaaacagttcggttggccaatgggcccagcatattta
cttgatgtggttggccttgatacgggtcatcatgcacaagcggtaatggctgaaggcttc
cctgaccgcatgggtaaaaatggcactgacgcgattgatataatgtttgaaaacaaacgc
ttagggcagaaaaactcaaaaggtttctatgcttactctgttgaccgtcgtggcaaaccg
aagaaagatatcgatgccactagctaccagttattaggtgcagcttttggtgaattaaaa
gcatttgaagcggatgacattattgcccgttgtatgatccctatgatcattgaaacagta
cgttgcttagaagaaggcatcatagcttctcctgctgaaggcgatatgggtctggtttac
ggtctaggtttcccaccattccgtggtggtgtattccgttatatagataccatgggcgta
gcaaacttcgtcgctctggcagacaaatacgcacatttaggtggcttatatcaagtgact
gatgcgatgcgtgaacttgcagccaataacggtagctactaccaagcctaa

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