KEGG   Shewanella denitrificans: Sden_0078
Entry
Sden_0078         CDS       T00344                                 
Name
(GenBank) CMP/dCMP deaminase, zinc-binding
  KO
K01493  dCMP deaminase [EC:3.5.4.12]
Organism
sdn  Shewanella denitrificans
Pathway
sdn00240  Pyrimidine metabolism
sdn01100  Metabolic pathways
sdn01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:sdn00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    Sden_0078
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sdn02044]
    Sden_0078
Enzymes [BR:sdn01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.12  dCMP deaminase
     Sden_0078
Secretion system [BR:sdn02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   Sden_0078
SSDB
Motif
Pfam: dCMP_cyt_deam_1 MafB19-deam Bd3614-deam APOBEC3 HVO_2753_ZBP
Other DBs
NCBI-ProteinID: ABE53375
UniProt: Q12T51
Position
87451..87894
AA seq 147 aa
MISKWAKRFFQMAELVGSWSKDPSTQVGAVITKHNRIVSVGFNGYPHGISDSAETDDRDM
KLLKTLHAEENAILFAKRDLDGCDIWVTHFPCPNCAAKIIQTGITGVFCPEQNADFLSRW
GDKISISQEMFLQAGVKVTWLPLDELA
NT seq 444 nt   +upstreamnt  +downstreamnt
atgatttccaagtgggcaaaacgattctttcaaatggcagagctggtggggtcttggagt
aaagatccttcgacccaagtgggagctgtgatcactaaacataatcgtatcgtttctgtg
ggctttaatggctaccctcacggtatttctgacagtgcagaaaccgatgatcgtgatatg
aagctacttaaaaccttgcacgcagaagaaaatgcgattctttttgctaagcgagatctc
gacggctgtgatatttgggtcactcactttccttgccccaattgcgccgccaagatcatt
caaacagggatcactggggtgttttgcccagaacaaaatgccgattttctctcccgttgg
ggcgacaaaatcagtataagccaagaaatgttcttacaagctggggttaaggtgacttgg
ttgccactggatgaattggcttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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