KEGG   Shewanella denitrificans: Sden_0350Help
Entry
Sden_0350         CDS       T00344                                 

Gene name
murE
Definition
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
Orthology
K01928  
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
sdn  Shewanella denitrificans
Pathway
Lysine biosynthesis
Peptidoglycan biosynthesis
Brite
KEGG Orthology (KO) [BR:sdn00001]
 Metabolism
  Amino acid metabolism
   00300 Lysine biosynthesis
    Sden_0350 (murE)
  Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Sden_0350 (murE)
Enzymes [BR:sdn01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     Sden_0350 (murE)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
390106..391614
Genome map
AA seq 502 aa AA seqDB search
MMRLSDILAPWFHYAGVESASSMSLDSRKVTQGCLFIALPGHQVDGRAYIEQAKAQGAVA
ALVHTDDPDSHGKVENLGSGITPWPVVNFFQLSSQLSAVAAQFYPLTPQKMALIGITGTN
GKTSVSQLIAQLTSLLGGKAAVMGTLGNGLWGQLVDSGNTTADAVTVMAQLHDFDVKGAD
ICAMEVSSHGLVQGRVTAVPFDIAVFTNLTRDHLDYHGDMASYASAKKRLFQFPSLKYAL
LNLDDDTGAQWFEELAATKRKGFSVSPNAKACYYTDKLHFDDAGVQGDFYYHDFGENAVS
QHKARLVSPLLGAFNLSNLLAAIAALHLSGVAMADLLAVTPKLVPVAGRMERFSLPQGAS
LVVDYAHTPDAIEQALKALRIHCHGQLWCVFGCGGDRDKGKRPLMAQAAERFADKLMVTS
DNARSEDPSAIIGDVLKGLTQPENALMEVDRVSAVKRVATLAKAGDIVLLAGKGHETYQE
IAGQRLDYDERALALTLSQVTL
NT seq 1509 nt NT seq  +upstreamnt  +downstreamnt
atgatgcgtttatctgatattttagccccttggtttcattacgctggggttgaatcagcc
tccagcatgagcttagacagccgtaaagtgacgcaaggatgtttatttattgccttgccc
gggcatcaagtggatggccgtgcttatatcgaacaagcgaaagcccaaggcgcggtagcg
gccttggtgcatacggatgaccctgattcccatggaaaggtagaaaatctaggcagcggt
atcacgccttggcctgtggtgaatttctttcagttaagcagtcagcttagtgccgttgcg
gcgcagttttatccactaacgccacaaaaaatggcacttattggaatcactggcaccaat
ggcaagacctctgtaagccaattgatcgcacagctcactagtttattgggcggcaaagcc
gccgttatgggcactttaggcaatggcctgtggggccagttagttgatagtggcaacact
accgccgatgccgtcactgtcatggcacagttacatgactttgatgtcaagggcgcagat
atttgtgccatggaagtctcaagccatggcttagtgcaagggcgagtgacagctgtgcct
tttgatattgcagtgtttactaacttaacgcgcgatcatcttgattatcatggagatatg
gcctcttacgccagcgctaagaagcggctatttcaattcccaagcctcaaatatgcattg
ctaaaccttgatgatgacacaggtgcccagtggtttgaggaacttgccgccactaaacgt
aaaggctttagtgttagccccaatgccaaggcttgctattacacggataagcttcatttt
gatgatgccggtgtgcaaggggatttttattatcacgactttggcgaaaacgcagtctct
caacataaagcgcggctggtatcgccactattaggtgcatttaatctatctaatttatta
gccgctattgccgctttacaccttagtggagtggccatggcggatttactcgccgtcacc
ccaaaattagtgccagttgctggacgcatggagcgtttttccctgccacaaggtgccagc
ctagtggtggattatgcccacacgccagatgccatagagcaagccctaaaagcgctgcgt
attcattgccatgggcaattatggtgtgtatttggctgtggcggtgacagagataaaggc
aaacggcccttgatggcccaagctgccgagcggtttgccgacaagttaatggtcaccagc
gacaatgctcgcagtgaagatccaagcgccatcattggcgatgtgcttaagggcttaact
cagcctgaaaatgccttaatggaagtggacagagtcagcgcagttaaacgggttgccaca
cttgctaaggcaggagacatagtgcttttggcgggcaaggggcatgaaacctatcaagaa
attgctgggcagcgtttagattatgatgaacgcgccttggcactgacattatctcaggtg
acattatga

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