KEGG T00344: Sden

Shewanella denitrificans: Sden_0553

Entry

Sden_0553 CDS T00344

Definition

Beta-N-acetylhexosaminidase (EC:3.2.1.52)

Orthology

K12373

hexosaminidase [EC:3.2.1.52]

Organism

sdn Shewanella denitrificans

Pathway

sdn00511	Other glycan degradation
sdn00520	Amino sugar and nucleotide sugar metabolism
sdn01100	Metabolic pathways
sdn01110	Biosynthesis of secondary metabolites

Class

Metabolism; Carbohydrate metabolism; Amino sugar and nucleotide sugar metabolism [PATH:sdn00520]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:sdn00511]

SSDB

Motif

Pfam:

Glyco_hydro_20 CHB_HEX Glyco_hydro_20b CHB_HEX_C CHB_HEX_C_1 DUF2237

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(625836..628409)

AA seq 857 aa
MATLKRLIPLAITLSSFNAFANFSQTELNEFAEKTSWSWQVIDNYHNGDKSHLANIELVN
QSRVDLPKGIADWVIYTNVIRPILTKKSQGLAFQFVQGDLYKITPTVNFKGLKAGDKLTI
PFEAENWASSHSDFMPRSFITQHSLTPAIFRSTDTEDSSKYIKPLNRPEQYQRYNTPRDH
WEKPTSAWRYDRYSPAQEYALTEDDAKRVIIPTPNKVKYSSSSTLLTADWQISYQGSLKS
EAHLLSETLDKKLKGSLKITPNNLPAQDKNLISLSIYNGDESWKPESYSLEIEKNRIEIV
GADSAGVFYAIQSLLSLTPSGTQSQIELPQLSANDAPHFEWRGFMYDMSRNFHGVEITKK
LIDQMAHYKLNKLHLHLTEDESWRIEIGGLPELTDLGSQRCFDLSETECMLPTRGSGPFK
TSQTNGFYSKEEFIDILKYAKQRHIEVIPEVDMPGHARAAIKAMELRHNKLIKSGDKTGA
NAYLLSDPLDKSVYSTAQFFNDNSINVCMDSTYNFVDKVAYEFQQMYREAGLKLTNIHIG
GDEVGVGSWTASPICNALYQAIDSGVKGPADLKAYFTRRAAEVLAARGLNIAAWEDGIMF
DRITPFPIEQFANNKVYVNAWDNIWEWGVSDRAYRLANEGYHAILSMGTHLYFDHPQEPD
PAERGLYWAARYTDVEKVFNFIPDNVYANADFTRAGEPIDNLEDLVGRALHQLNKPENIA
GIQGQVWSETIRTPEQLGEMIFPRIIALAERGWHRNTVLASEQQEQARQWAKFASVLALK
EYPKLEEAGVSFYLPIPGAKRIDNQVHIISQLPGLTLEYSLDNGENWQVYNKPIRLPDAI
KVRSRSGKHTSRVGSFE

NT seq 2574 nt +upstreamnt +downstreamnt
gtggctactttaaaaagattaatccctttagctattacactttctagctttaacgcattc
gccaattttagccaaacagagttaaacgaatttgccgaaaaaacgagctggtcatggcaa
gtaattgataactatcataatggcgataaatcgcatctcgccaatattgagctagtcaac
caatctcgtgttgatttacctaaaggcatagctgactgggtgatctataccaatgttatt
cgcccaattctaacgaaaaagtcccaaggattggcatttcaatttgtacaaggagatctt
tataaaattaccccgacagtaaactttaaaggccttaaagctggtgataagcttactatt
ccctttgaagccgaaaactgggcatcttctcatagcgactttatgcctcgaagctttatc
actcaacactcacttaccccagcaatcttcagatctactgataccgaagatagcagcaaa
tacataaagccactcaatcggccagaacaataccaacgttataatacgcctagagatcac
tgggaaaagcccaccagcgcatggcgctatgaccgctatagccctgctcaagaatatgcg
cttacagaggatgatgccaagcgagtgatcatccctacccccaataaagtgaagtacagt
agctctagcactctattaactgctgattggcaaatatcttatcaaggaagcttaaaatca
gaagctcacttactatcagaaacattagataagaagctaaaaggttcgctaaagatcacc
ccaaacaatctgccagctcaagataaaaaccttatttcattatctatttataatggtgat
gaaagctggaagcctgagagttacagcttagaaattgaaaaaaatcgtattgaaattgtc
ggcgcagatagcgcaggtgtcttttatgctattcaaagtttattgagtctgacaccaagc
ggcacgcaatctcaaattgaattacctcaacttagcgccaacgatgctccacattttgaa
tggcgcggctttatgtacgatatgagccgtaatttccatggcgtggagatcaccaaaaaa
ctcatcgaccaaatggcgcattacaaactcaataagctacatcttcacttaactgaagat
gagtcttggcgaatagaaattggcggactaccagagctgacggatttaggtagccagcga
tgttttgacctatctgaaactgaatgtatgttgccaacaagaggctcggggccttttaaa
acgtcacaaacaaatggcttttacagcaaagaggagtttatcgatattctcaagtatgcc
aagcaaaggcatattgaagtcatcccagaggttgatatgccaggtcatgcccgcgcagca
atcaaggcgatggaacttagacacaataagttaataaaatctggcgataaaaccggagct
aacgcctatctgttgtcagatccactggataaatctgtgtactcaacagctcagttcttt
aatgacaattccatcaatgtttgtatggactccacctataattttgtcgataaagtggct
tatgaatttcaacaaatgtaccgcgaagcaggtttaaaactcacgaatatccatatcggt
ggcgatgaagtcggcgtaggctcttggaccgcgtctcctatttgtaatgcattataccaa
gctatagatagcggcgtaaaaggtcctgcagatcttaaagcctatttcactcgccgcgca
gcagaagtattagccgcgcgtgggctgaatattgctgcatgggaagatggcattatgttt
gacagaataacacctttccctatcgagcaatttgctaataataaagtctacgttaatgct
tgggataatatttgggaatggggtgtatctgaccgcgcatatcgactagcaaatgaaggc
taccatgcgattctttctatgggcacccacctgtactttgaccacccgcaagagcccgat
ccagcagaacgggggctatattgggcagcgcgctataccgatgtcgaaaaggtatttaac
ttcatccctgacaatgtatacgccaacgctgacttcacccgtgcgggtgaacccattgat
aacttagaagatctagttggacgcgctttacatcagctcaataagcctgagaatattgct
ggtattcaaggtcaagtttggagtgaaacaattcgcactcccgagcaattaggagaaatg
atttttccgcgaattattgccctagctgagcgaggatggcatcgcaatacagtgcttgcc
agtgagcaacaagagcaagcgcgtcaatgggctaagtttgcgagtgtgctcgcactgaaa
gagtatccaaagcttgaagaagctggagtaagcttttacttgccaattcctggtgccaaa
cgtatcgacaatcaagtgcatataatcagtcaattacctggattaacacttgagtacagc
ttagataatggagaaaactggcaagtgtataacaagcctatacgcttacctgacgccata
aaagttcgctcacgttcaggcaagcatacgagtcgtgtaggaagctttgagtag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SDN (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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