KEGG S.denitrificans: Sden

Shewanella denitrificans: Sden_0736

Entry

Sden_0736 CDS S.denitrificans

Definition malate dehydrogenase (EC:1.1.1.40)

Orthology K00027 malate dehydrogenase (oxaloacetate-decarboxylating)
[EC:1.1.1.38]

Pathway sdn00620 Pyruvate metabolism
sdn02020 Two-component system

Class Metabolism; Carbohydrate Metabolism; Pyruvate metabolism
[PATH:sdn00620]
Environmental Information Processing; Signal Transduction;
Two-component system [PATH:sdn02020]

SSDB

Motif Pfam: Malic_M malic
PROSITE: MALIC_ENZYMES

Other DBs NCBI-GI: 91792098
NCBI-GeneID: 4016842
JGI: Sden0736
UniProt: Q12RA0

Position complement(853327..855015)

AA seq 562 aa
MDDTKRPLYLPFAGPAILEAPLINKGSAFSEEERIFFNLEGLLPYVIETIEEQAARAYAQ
FSNFSNDLDKHIYLRNIQDTNETLFYRLVRNNITEMMPIIYTPTVGLACERFSKNYRRNR
GLFISYSNKDRIDDILNNSTRHKVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCG
GISPAYTLPITLDVGTDNQELLDDPMYMGWRHRRIEGQDYADFVEAFMEAVHRRWPDVLI
QFEDFAQRNAMPLLERYKDQYCCFNDDIQGTAAVTVGSLLAASKAANTQLSKQRVVFLGA
GSAGCGIAEAIVAQMISEGISEAQARSQVFMVDRLGLLQDNTANLLPFQQKLAQSSATVS
QWHIEGDSVSLLNVINNAKPTVLIGVSGSPGQFTEAVIRAMHLHCPRPIVFPLSNPTSRV
EATPEDVLNWTNGQALVATGSPFEPVTIGDETFEIAQCNNSFIFPGIGLGVLACRAKRVS
DEMLMASSRALAECSPLGTTRTGSLLPKLDDIQKVSKYIAFAVAKVAMAQGLALPLTDEL
LNKSIEKNFWEPKYRRYKRTSF

NT seq 1689 nt +upstreamnt +downstreamnt
atggacgatactaaacgccctctctatcttccttttgcaggtccggcaatcctcgaagct
cccttgatcaacaaaggcagcgcttttagtgaagaagagcgcattttctttaatcttgaa
gggttacttccttatgttattgaaaccattgaagagcaagcggcccgtgcctatgcccag
ttcagtaatttcagtaacgatctcgataagcatatctatctaagaaacattcaagatact
aacgagaccttattctatcgattggtgcgtaacaatatcaccgaaatgatgcctatcatc
tataccccaaccgtgggtctggcttgtgagcgtttctctaaaaactatcgccgtaaccgt
ggtctgtttatctcctattccaataaagacagaatcgacgacattctaaacaattcgact
cgccacaaggtaaaagtcatagttgtcaccgatggcgaacgtattttaggtcttggggat
caaggcattggcggcatggggatcccgattggtaaactgtccctgtataccagctgtggc
ggcataagccctgcctataccttgcctattaccttagacgtaggtacagataaccaagag
ttattggatgaccctatgtacatgggctggcgtcaccgccgcatagaaggccaagattac
gccgactttgttgaagcctttatggaagctgtgcatcgcagatggcctgatgtgttaatc
caatttgaagactttgctcaacgcaatgccatgccattgttggagcgttataaggatcag
tactgctgtttcaatgatgacatacaaggcacggctgccgtgactgtgggttcattatta
gccgcgagtaaagcggcaaatacccagctcagtaaacaaagagtggtattcttaggtgcc
ggtagcgcaggttgcggcattgccgaagcaatcgtggcgcagatgatctctgaagggatt
agtgaagcacaagcccgctcacaagtcttcatggttgaccgcttagggctactgcaagat
aacacagctaacttattgccattccaacaaaaacttgcccaaagtagtgcgacggttagt
caatggcacattgaaggcgatagcgtgtcactgctaaatgttatcaataatgctaagcct
accgtattgataggtgtctctggctcaccgggtcaattcactgaagccgtgatccgcgcc
atgcatttacattgcccacggccgatagtgttcccgttatcaaatcctaccagtcgtgtg
gaagccacacctgaagacgtgcttaattggaccaatggccaagcactggttgccactggt
agcccgtttgagcctgtgaccattggtgatgaaacctttgagattgcccagtgcaacaac
agtttcattttcccaggtattggcctaggggtattggcttgtcgtgctaaacgcgtgtct
gatgagatgttaatggcatccagtcgtgccttggccgagtgctctccccttggaacaacg
agaacaggttctctattgcctaaactcgatgatattcaaaaagtcagcaagtatatcgcc
tttgcggttgctaaagtggcgatggctcaaggcctggcactaccactgactgatgagcta
ttgaataagtctatcgagaaaaacttttgggaacctaagtatcgccgttataagcgtact
tcattctaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-SDN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (2)   
   PROSITE (1)   
All databases (16)

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