KEGG   Shewanella denitrificans: Sden_1026Help
Entry
Sden_1026         CDS       T00344                                 

Gene name
deoA
Definition
thymidine phosphorylase (EC:2.4.2.4)
Orthology
K00758  
thymidine phosphorylase [EC:2.4.2.4]
Organism
sdn  Shewanella denitrificans
Pathway
Pyrimidine metabolism
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sdn00001]
 Metabolism
  Nucleotide metabolism
   00240 Pyrimidine metabolism
    Sden_1026 (deoA)
Enzymes [BR:sdn01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.2  Pentosyltransferases
    2.4.2.4  thymidine phosphorylase
     Sden_1026 (deoA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
1173774..1175105
Genome map
AA seq 443 aa AA seqDB search
MFLAQEIIRKKRNGQALTAAEIQFFVNGITTNSVSEGQIAAFGMAVYFNDMNMDERIALT
IGMRDSGTVLNWDSLGLNGPVIDKHSTGGVGDVISLMLGPMAAACGGYVPMISGRGLGHT
GGTLDKFDAILGYQTEPSSELFRKVVKEAGVAIIGQTGDLVPADKRFYSIRDNTATVESI
SLITASILSKKLAAGLDALVMDVKVGSGAFMPSYAASEELARSIAAVANGAGTKTTALLT
DMNQVLASCAGNAVEVVEAINFLTGEYRNPRLYEVTMGLCAEMLVLGGIAQNEIEARTKL
NTVLDNGKAAEVFGKMIAGLGGPTDFIEAYDKYLPQAKIIRPVFSDAQGYAHSMDTRELG
LAVVTLGGGRRKPGDKLDYSVGLTQVCALGEQISTDKPIAMIHAQTEDDFLEAELAVKNA
IKIQSSMPEKMPEIYRYIRAADL
NT seq 1332 nt NT seq  +upstreamnt  +downstreamnt
atgtttttagctcaagagataattcgtaaaaaacgtaatggccaagcgttaacggctgca
gaaattcagttcttcgtgaatggcattactacaaattcagtttcagaagggcaaatcgcc
gcttttggaatggcggtttactttaatgacatgaatatggacgagcgcatcgcgttaacc
ataggcatgcgagactcaggcacagtacttaactgggacagcttaggccttaatggccct
gttatcgataaacacagtactggcggggtcggtgatgtcatcagcctaatgcttggccct
atggcggcggcatgtggcgggtacgttcctatgatttcggggcgcggcttaggtcacaca
gggggcaccttagataaatttgatgccattcttggttatcaaactgagccatcgagcgaa
ctgtttagaaaagtggttaaagaagcaggcgtcgccattattggtcaaactggagactta
gttccagcggataagcgcttttattcgattcgagataataccgcgacggttgagtcaatc
tcattgatcaccgcctctattttgtcgaagaaattagcggcgggtttagatgcgctggta
atggatgtcaaagtgggtagcggcgcttttatgccaagctacgccgcatcggaagagcta
gctcgcagtattgcggcagtggctaatggtgcgggtactaagactacagctttgctaaca
gacatgaaccaggtgcttgcatcttgcgcgggtaatgccgttgaagtcgtcgaagcgatt
aacttcttaaccggcgagtatcgcaatcccagactctatgaagtcaccatgggcttatgt
gctgaaatgctagttttggggggtatcgcgcaaaatgagattgaggcccgtactaaactt
aatacagtactcgataatggcaaagcggccgaagtctttgggaaaatgattgcaggcctt
ggcggaccgactgactttattgaggcctatgataagtatttgcctcaagctaagatcatt
cgccctgtgttcagcgatgcacaaggctatgcccacagcatggatacccgcgagcttgga
ttagcggttgtgaccttagggggcgggcgtcgtaagccaggcgacaaattagattacagc
gtaggtttgacccaagtgtgcgcccttggagagcaaatttctacggataagccgattgcc
atgatccatgcacagacggaagatgatttcctcgaagcggaactagcagttaaaaatgcg
ataaaaattcaatcttctatgcctgaaaaaatgccagagatttatcgctacatccgtgca
gcagacttataa

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