KEGG T00344: Sden

Shewanella denitrificans: Sden_1245

Entry

Sden_1245 CDS T00344

Definition

malate synthase (EC:2.3.3.9)

Orthology

K01638

malate synthase [EC:2.3.3.9]

Organism

sdn Shewanella denitrificans

Pathway

sdn00620	Pyruvate metabolism
sdn00630	Glyoxylate and dicarboxylate metabolism
sdn01100	Metabolic pathways
sdn01120	Microbial metabolism in diverse environments

Module

sdn_M00012

Glyoxylate cycle

Class

Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:sdn00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:sdn00630]

SSDB

Motif

Pfam:

Malate_synthase HpcH_HpaI

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1454531..1456198

AA seq 555 aa
MTAEQLVAKYTQGEAKSLSSQQAETDPSPLAIIGPDVQGQEELFTPGALALLTALSENFA
GEVTELLAKRSQKQARIDKGELPDFLPETRAIRDGQWSIRGIPADLTDRRVEITGPVDRK
MIINALNAKVKVFMADFEDSLAPSWQKVIEGQINLRDAVRGDISFTAPDTGKQYSLDPDP
AVLICRVRGLHLKEKHVEYQSNAIPGALFDFALYFYHNYHQLLAKGSGPYFYLPKLESHL
EARWWAKVFAFVEDRFCLKPGTIKCTCLIETLPAVFEMDEILYELRSNIVALNCGRWDYI
FSYIKTLKNHADKVLPDRQAVTMDTKFLSAYSRLLIKTCHKRDALAMGGMAAFIPAKDEA
TNAQVLQKVRGDKELEARNGHDGTWVAHPGLADTAMEIFNRYIGPGETNQLHITRDVDAP
ISASELLSPCDGERTETGMRLNIRIAVQYIEAWIQGNGCVPIYGLMEDAATAEISRTSIW
QWIKHGKSLSNGKLVTKELFNSMLKEELVTVKQELGSERFNSGQFAKAAELFTSITTADE
LVDFLTLPGYELLTA

NT seq 1668 nt +upstreamnt +downstreamnt
atgactgcagaacaactggttgcaaaatacactcagggcgaggctaagagcttatcgtct
cagcaagctgaaacagacccttcgcctttggcgattatagggccagatgttcaaggtcaa
gaagaactctttacaccgggtgcgttagccttattaaccgccttaagcgagaactttgct
ggcgaggtgactgagctgctggctaagcgatctcagaaacaggcacgaatagataaaggc
gaattgcctgattttttaccagaaacccgtgccattagagatggacaatggtcaattaga
ggtattccggcagatctcaccgatcgtagggtagaaatcacaggtcctgttgaccgtaag
atgatcatcaatgccctcaatgccaaggtcaaagtattcatggctgattttgaagactca
ttggcaccgagttggcagaaagttatcgaaggtcaaattaacctgcgtgatgctgtgcgg
ggggatatcagttttaccgcccctgatacgggcaagcaatacagcttagatcctgatcca
gccgtgcttatttgccgagttcgaggcctgcacttaaaagagaaacacgttgaatatcaa
agcaacgcaatccccggtgctttattcgatttcgcgctgtacttttatcataactaccat
caattattggctaaaggttcaggcccgtatttttatcttccaaaacttgaaagccattta
gaagcgcgctggtgggcaaaagtcttcgcgtttgtcgaagacagattctgtctaaagcct
ggcaccattaaatgcacttgcttgattgaaactttacctgccgtgtttgaaatggatgaa
attctttatgaattacgttcaaacatagtggcgctaaattgcggccgctgggattatatt
ttcagttatatcaaaacgttaaaaaaccatgctgacaaggtcttaccagaccgtcaagcc
gtaaccatggataccaaattcctaagtgcttactcacgcttactgatcaagacctgccat
aaacgcgacgccttagccatgggcggtatggctgcctttattcctgcaaaagatgaagcg
accaatgcacaagtgttacaaaaagtgcgcggcgataaagagcttgaagcgcgtaatggc
catgatggcacttgggttgcccatccgggacttgcggatactgcgatggaaatcttcaat
cgatacataggtccaggtgagaccaatcagctgcatatcacccgtgatgtcgatgcgcca
atatcggccagtgaattactcagcccttgcgatggcgaacgtactgaaacgggtatgcga
cttaatattcgtatcgcagtgcaatatatcgaagcttggatccaaggaaacggctgcgtg
cctatctacggcttgatggaagatgctgcaacagctgaaatttctcgaacgtccatctgg
caatggattaagcacggtaaaagcctttccaacggcaagttagtgaccaaagaattgttc
aacagcatgcttaaagaagaattagtcacagtaaaacaagaattgggcagtgaacggttt
aatagtggccaatttgccaaagccgctgagctattcaccagtattaccacggccgatgag
ctagttgatttcttaaccttaccgggttacgagctgttaacagcttaa

All links

Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SDN (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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