KEGG   Shewanella denitrificans: Sden_1602
Entry
Sden_1602         CDS       T00344                                 
Name
(GenBank) phenylalanyl-tRNA synthetase, alpha subunit
  KO
K01889  phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Organism
sdn  Shewanella denitrificans
Pathway
sdn00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:sdn00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Sden_1602
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sdn01007]
    Sden_1602
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sdn03016]
    Sden_1602
Enzymes [BR:sdn01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     Sden_1602
Amino acid related enzymes [BR:sdn01007]
 Aminoacyl-tRNA synthetase
  Class II (U)
   Sden_1602
Transfer RNA biogenesis [BR:sdn03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    Sden_1602
 Prokaryotic type
    Sden_1602
SSDB
Motif
Pfam: tRNA-synt_2d Phe_tRNA-synt_N tRNA_synthFbeta
Other DBs
NCBI-ProteinID: ABE54886
UniProt: Q12NU0
Position
1865192..1866175
AA seq 327 aa
MQQLTEIVAQALAEVANASDLKALDDIRVDYLGKKGKITDMMKMMGSLSAEEKPAFGQAV
NQAKQAVQQTLSERIDGLKASELEAKLIAEKIDVTLPGRTLELGGLHPVTRTIERIETFF
GELGFVVKQGPEIEDDFHNFDALNISEHHPARADHDTFYFNPKVMLRTQTSGVQIRTMEH
EKPPLRIISPGRVYRNDYDQTHTPMFHQVEGLMVAENVNFAELKGILHDFLRNFFEEDLQ
VRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRSVGIDPEKYSGFAFGMGVE
RLTMLRYGVNDLRAFFENDLRFLKQFK
NT seq 984 nt   +upstreamnt  +downstreamnt
atgcagcagttaaccgagatcgtagcgcaagctttagcagaagttgctaacgccagtgat
ctaaaggcattggatgatatccgtgtcgattacctaggcaagaaaggtaagatcactgac
atgatgaaaatgatgggaagcctaagtgcagaagaaaaacctgccttcggtcaagccgtc
aaccaagccaaacaggccgtgcaacagaccttatcagagcgtatcgatggtctaaaagcg
agtgagttagaggcaaaattgattgccgaaaaaatcgatgtcactctgccgggccgtacc
cttgaacttggcggtttgcatcctgtgactcgcaccatagaacgcattgagaccttcttt
ggtgaattaggcttcgtggttaagcaagggccagaaatcgaagatgattttcataatttc
gatgccttgaatatttctgagcatcacccagcgcgcgccgatcatgacaccttctatttc
aatcctaaggtgatgctgcgtacgcaaacctcaggggtacaaattcgtaccatggaacac
gagaaaccgccattgcggattatttctccaggccgtgtttaccgtaacgattatgaccaa
actcatacgcctatgttccatcaggttgaaggcttaatggtggctgagaatgttaatttt
gccgagcttaaaggcatattgcatgattttttacgtaatttcttcgaagaagacttacaa
gtgcgcttccgtccttcttacttcccgtttactgagccttcggctgaagtggatgtgatg
ggtaaaaatggcaaatggcttgaagtgctaggctgcggcatggtgcacccaaatgtgcta
cgcagcgtgggcatagatcctgagaaatattctggttttgcttttggtatgggcgttgag
cgtttaaccatgttgcgttatggcgtcaatgacttacgtgccttcttcgaaaacgattta
cgttttcttaagcaattcaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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