KEGG T00344: Sden

Shewanella denitrificans: Sden_1814

Entry

Sden_1814 CDS T00344

Definition

(GenBank) succinyldiaminopimelate desuccinylase

K01439

succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]

Organism

sdn Shewanella denitrificans

Pathway

sdn00300

Lysine biosynthesis

sdn01100

Metabolic pathways

sdn01120

Microbial metabolism in diverse environments

sdn01230

Biosynthesis of amino acids

Module

sdn_M00016

Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine

Brite

KEGG Orthology (KO) [BR:sdn00001]
Metabolism
  Amino acid metabolism
   00300 Lysine biosynthesis
    Sden_1814
Enzymes [BR:sdn01000]
3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     Sden_1814

SSDB

Motif

Pfam:

Peptidase_M20 M20_dimer Peptidase_M18

Other DBs

NCBI-ProteinID:

ABE55098

JGI:

Sden1814

UniProt:

Q12N78

Position

complement(2139802..2140932)

AA seq 376 aa
MSTDVTQLAMALIARPSVTPLDEGCQTLMGKHLSAAGFTLEPMVFEDTTNLWARRGTQAP
VFCFAGHTDVVPIGDLARWHTPPFEPTIIDGYLHGRGAADMKGSLAAMLVATERFVAKHP
HHNGSIAYLITSDEEGPFINGTTRVIDTLEARNEKITWALVGEPSSTYKLGDVVKNGRRG
SLTGNLTVNGVQGHVAYPHLADNPIHKAAPALTELAQMHWDNGNEFFPPTSFQIANINGG
TGASNVIPGNLEVMFNFRYSTEVTADELIARVLGILDAHGLDYDISWVFNGLPFLTGDGP
LLEATKSAIREVTGYDTDPQTTGGTSDGRFIAPTGAQVIELGPVNATIHKVNECVKIADL
EQLALCYEKLLEKLLC

NT seq 1131 nt +upstreamnt +downstreamnt
atgagcactgacgtaacccaacttgccatggcgcttatcgcccgcccgtctgtaacgcct
ttagacgaaggttgtcaaaccttgatgggtaaacacttatccgcggcgggttttacctta
gagcccatggtgtttgaggataccactaacctatgggcgcgacgcggcacacaggcaccg
gttttttgttttgctggccacacagacgttgtgcctataggggatcttgcccgctggcac
actcctccttttgagccgaccatcatagatggttatttacacggccgcggcgctgctgac
atgaaaggttcacttgccgccatgttggtggcaactgaacgttttgttgctaaacatccg
catcataacggctcgattgcttatttaatcaccagcgatgaagaaggccctttcatcaat
ggcaccactcgagtgatagacaccttagaagcccgcaatgagaaaattacttgggcactc
gttggtgaaccatcatccacctataaactcggcgatgtcgtaaaaaatggccgccgtggt
agcttaacggggaatttaaccgtcaatggcgtgcaaggtcacgtggcctaccctcatctt
gctgacaaccctattcataaggctgccccagcactgactgagcttgcgcaaatgcactgg
gataatggcaatgagtttttcccgcccaccagtttccaaatcgccaatatcaatggcggc
acaggtgcatcgaatgtgatccctggtaacctagaggtcatgtttaacttccgctactca
accgaagtcacagccgatgagctcatcgcgcgagtgcttgggattttagatgcccacggc
ctagattatgacatcagctgggtattcaatggtctgccatttttaaccggagatggcccg
ttacttgaagccactaaaagtgccattcgtgaagtcacaggttatgatacagatccacaa
accacaggcggcacctcagatgggcgttttattgcgccaaccggagcccaagttattgag
ttaggtccagtaaatgccaccatacataaggtcaatgagtgtgtaaagattgccgattta
gagcaattggctctttgctatgaaaagcttttggaaaaactcttgtgctaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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