KEGG T00344: Sden

Shewanella denitrificans: Sden_1831

Entry

Sden_1831 CDS T00344

Definition

isocitrate dehydrogenase, NADP-dependent (EC:1.1.1.42)

Orthology

K00031

isocitrate dehydrogenase [EC:1.1.1.42]

Organism

sdn Shewanella denitrificans

Pathway

sdn00020	Citrate cycle (TCA cycle)
sdn00480	Glutathione metabolism
sdn01100	Metabolic pathways
sdn01110	Biosynthesis of secondary metabolites
sdn01120	Microbial metabolism in diverse environments
sdn01210	2-Oxocarboxylic acid metabolism
sdn01230	Biosynthesis of amino acids

Module

sdn_M00009	Citrate cycle (TCA cycle, Krebs cycle)
sdn_M00010	Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:sdn00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:sdn00480]

SSDB

Motif

Pfam:

IDH

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2157091..2159313

AA seq 740 aa
MKDNSPTIIYTETDEAPALATLSLLPIIRTFTSAAGVKVETRDISLSGRILANFPEKLTA
EQKIADALTELGEMANRPEANIIKLPNISASIPQLKVCIAELQAKGYDIPNYPDEPKNDA
EKETQSRYDKIKGSAVNPVLREGNSDRRAPTSVKNYAKKHPHSMGKWASDSKSHVAHMNE
GDFYASEQSVTLTKADKVSIVFEKADGTEQVLKAGLSLLTDEVIDAAVMSNKALIEFYSR
EIEAAKSEDVLLSLHLKATMMKVSDPILFGHAVKVFFKDVFVKHGALFAELGVDVNNGFG
DVYAKIKSLPEAKRAEIEADIAAVYAARPALAMVDSDKGITNLHVPSDIIIDASMPAAIR
SSGQMWGPDGQLKDTKALIPDRCYAGVYQETIAFCKANGAFNPSTMGSVPNVGLMAQKAE
EYGSHDKTFEIKAKGTVKVINQAGDVLMSHDVDSGDIYRMCQVKDAPIRDWVKLAVKRAR
LSNTPAIFWLDSKRAHDAELIKKVNQYLPEHDTSGLDIQIMSPVEATRATLARIIKGEDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQVEKEGH
LRWDSLGEFLALAASLEHLSQTQSNPKAQVLADSLDVAIGVFLDTNKSPSRRVGELDNRG
SHFYLAMYWAQALAAQTADAELAAHFATLANALSTQEEIIIAELNGSQGPAVDLGGYYRL
DLAKASKAMRPSATLNALID

NT seq 2223 nt +upstreamnt +downstreamnt
atgaaagataattctccaactatcatctacacagaaaccgatgaagcgccagcactggca
accttatctctattgcctattatacgcacctttacctctgcagccggggttaaagttgaa
acccgtgacatttcattgtcgggccgtatcctagctaacttcccagaaaagctaactgct
gagcaaaaaattgctgatgcgttaactgagttaggtgaaatggctaatcgtccagaagct
aacatcatcaagttgccaaacatcagtgcttctattcctcagttaaaagtctgtatcgct
gagcttcaagccaaaggctacgacattccaaactacccagatgagcctaagaatgatgct
gaaaaagaaactcagtctcgttatgacaagattaaaggcagtgcggtaaatccagtattg
cgtgaaggcaactctgaccgacgtgcaccgacgtcagtgaaaaactacgccaagaaacac
ccacattcaatgggtaagtgggctagcgattcaaagtctcatgttgcccacatgaatgaa
ggcgatttctacgctagtgagcagtctgtcaccttaactaaagccgacaaagtcagcata
gtgtttgaaaaagccgatggcacagagcaagtattaaaagcagggttaagcttactcact
gatgaagttatcgatgcggcagtgatgagcaacaaagccttaatcgaattctatagccgt
gaaatcgaagccgctaaatctgaagacgtgttgttatcactgcatttaaaagccaccatg
atgaaagtctcagatcctattctgttcggtcatgcggttaaagtcttcttcaaagacgtg
tttgttaagcacggcgcgttatttgctgaacttggtgttgatgttaacaacggctttggc
gacgtgtatgccaaaattaagtcgcttccagaagcaaagcgtgctgaaattgaagctgac
attgccgctgtgtatgccgcacgtccagcccttgccatggttgattctgataaaggtatt
acaaaccttcatgtgccaagtgacatcatcatcgatgcctctatgccagctgctattcgt
tcatcaggtcagatgtggggacccgatggccagttaaaagacactaaagccttgatccca
gatcgctgctacgccggtgtttaccaagaaacgatagccttttgtaaagccaatggcgcc
tttaacccaagcactatgggcagcgtgccaaacgtaggtctaatggcgcaaaaagccgaa
gagtacggtagtcacgacaagacattcgaaatcaaagccaaaggtacggttaaggtgatt
aaccaagctggcgatgtgttaatgagccatgatgtcgatagcggtgatatttaccgtatg
tgtcaggttaaagatgcacccattcgtgactgggtaaaacttgcagttaagcgtgcacgt
ttaagcaacacgccagccattttctggttagacagcaagcgtgctcacgatgcagagctt
atcaagaaagtgaaccagtatttacctgagcatgacactagcggcttagacatccagata
atgtcaccggttgaagcgactcgtgctaccttagcgcgcatcatcaaaggtgaggacact
atctcagtgaccggtaacgtattacgtgactacctaactgacttgttccccattcttgaa
ttaggcaccagtgctaaaatgctgtctattgtgcccttaatgaacggcggcggcttgttt
gaaacaggcgcaggtggcagtgcaccaaagcacgtgcagcaggttgagaaagaaggtcac
ttacgttgggattctcttggtgaattcttggccttagcggcatcccttgagcatttaagc
cagactcaatcaaaccctaaagctcaagtgcttgcagatagcttagatgtggccattggt
gtgttccttgataccaacaagtcaccttcacgccgtgtgggtgagcttgataaccgtgga
agtcacttctaccttgctatgtattgggcacaagccttagcagcgcaaacggcagatgct
gaacttgcggcgcattttgcaactcttgctaatgcacttagcactcaggaagaaatcatc
atagctgaacttaatggttcacaaggtcctgcggtagatttaggtggttattaccgttta
gatctggctaaagccagcaaggcgatgcgcccaagtgccactttgaatgcactgatcgac
taa

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SDN (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (29)   

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