KEGG   Shewanella denitrificans: Sden_2287
Entry
Sden_2287         CDS       T00344                                 
Name
(GenBank) Exodeoxyribonuclease I subunit C
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
sdn  Shewanella denitrificans
Pathway
sdn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sdn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Sden_2287
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdn03400]
    Sden_2287
Enzymes [BR:sdn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     Sden_2287
DNA repair and recombination proteins [BR:sdn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Sden_2287
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Sden_2287
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Sden_2287
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: ABE55567
UniProt: Q12LV9
Position
2711732..2713144
AA seq 470 aa
MTTALQPTLFWHDYETFGANPAKDRPSQFAGIRTDLDLNIIGEPETFYCKLATDYLPSPE
AILITGITPQLANMKGIPETEFMGRINALFSQENTCVVGYNSLRFDDEVSRYGFYRNFID
PYAREWQNGNSRWDIIDLVRACYAFRPDGINWPRKEDGTVSFKLELLTQANGLSHEKAHD
AMSDVYATIAMAKLIKQVQPKLYDYYFSLRRKQAVAAQIDVLKMQPLVHVSSKISALNAC
TTLIAPMAYHPTNKNAVLCVNLAMDISPLLELSAEEIAARMYTSRADLAPDELPIPLKQI
HLNKCPFIASPKLLDDDLTSRLNFDKAFAREQYKRLKQHPELREKLVGVFEQTKEFNHSD
PDLMLYGGGFFSHADKAKMDIIRQTQPQNLAALDLKFDDNRIAEMLFRYRGRNYPELLDH
DESVRWREFCQSRLADADYVIKLENLLEASAQDEHKQKLLRALCQYLQAL
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgacaacagctcttcagccgaccctgttttggcacgattatgaaacatttggcgccaat
cctgctaaagacaggccttctcagtttgccggtatccgaaccgatcttgatttaaacatc
ataggtgagccagaaaccttctactgcaaattagccacagattacctgccatcacccgaa
gccattttaatcacaggtatcacgccacaattggccaatatgaaaggcatacctgaaact
gaatttatgggccgcattaatgcccttttcagtcaagagaatacctgtgtcgtgggttat
aactcgctgcgctttgatgatgaagtcagccgctatggtttttaccgtaactttatcgat
ccttacgccagagaatggcaaaacggtaattcccgttgggacattattgatttagtgcgt
gcttgttatgcctttagacccgatggtataaattggccccgtaaagaagatggcactgtc
agctttaaattagagctgttaacccaagccaatggtctcagtcatgagaaagctcacgat
gcgatgtctgatgtgtatgccaccatcgccatggctaaattgattaaacaagtacaacct
aagctgtatgactactattttagtttacgccgtaaacaagctgtagcggcgcaaatcgat
gtgcttaagatgcagcctttggtgcacgtgagctctaaaattagcgccctgaatgcctgt
accactttgattgcccctatggcttatcatcccaccaataaaaatgccgtattgtgcgtt
aatttggccatggatattagccctttactggaattgtcagcggaagagatagcggcgcgc
atgtacacttcaagagcggacttagcccctgatgaattgccaatcccgttaaagcaaatt
catcttaataagtgcccttttattgcttcacccaagctactcgatgatgacctaacctca
aggcttaatttcgataaagcttttgcccgcgagcaatacaaacgtcttaaacagcaccca
gaactcagagagaaattagttggcgtgtttgagcaaacgaaagagtttaaccatagcgat
ccggatctcatgctctatggcggtggattctttagtcacgcggataaagcaaaaatggac
atcatacgtcagactcaaccgcagaatttagccgcattggaccttaaatttgatgataat
cgcattgctgaaatgttatttcgctaccgcggccgcaattacccagaattacttgatcat
gacgaatcagtgcgctggcgggaattttgccaatctagacttgccgatgctgattatgta
atcaaactagagaatttattggaagctagcgcacaagatgaacacaaacagaaattatta
agagcactttgtcagtatttacaagcactttag

DBGET integrated database retrieval system