KEGG   Shewanella denitrificans: Sden_2454Help
Entry
Sden_2454         CDS       T00344                                 

Definition
tryptophan synthase subunit beta (EC:4.2.1.20)
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
sdn  Shewanella denitrificans
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:sdn00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    Sden_2454
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Sden_2454
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    Sden_2454
Enzymes [BR:sdn01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     Sden_2454
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
2925250..2926455
Genome map
AA seq 401 aa AA seqDB search
MTELKLDPYFGEYGGMYVPQILVPALKQLESAFVDAQQDPAFQAEFTDLLKNYAGRPTAL
TLTRNLSPNPLVKIYLKREDLLHGGAHKTNQVLGQALLAKRMGKKEIIAETGAGQHGVAT
ALACALLGLKCKVYMGAKDVERQSPNVFRMKLMGAEVIPVTSGSATLKDACNEAMRDWSA
SYDKAHYLLGTAAGPHPFPTIVREFQRMIGEETKQQILEKEGRLPDAVIACVGGGSNAIG
MFADFIDEPSVELIGVEPAGKGIDTPMHGAPLKHGKTGIFFGMKAPLMQDRDGQIEESYS
VSAGLDFPSVGPQHAHLNAIGRARYESATDDEALAMFQQLARCEGIIPALESAHALAYAV
KLAKTATKETILVVNLSGRGDKDIFTVSDILAAKEQESGND
NT seq 1206 nt NT seq  +upstreamnt  +downstreamnt
atgacagagcttaagcttgacccttattttggtgaatatggcggcatgtacgtaccgcaa
attctggtgcccgcccttaaacaattggaaagcgcttttgtggacgcccagcaagaccca
gcatttcaggcagaatttaccgatttactgaaaaactacgcaggtcgcccaacggcgcta
actttaacccgtaacttaagccctaatccgctagtgaaaatttacctaaagcgtgaagac
ttactccacggcggcgcccataagactaaccaagtgttaggtcaggcattgctcgctaag
cgtatgggtaagaaagagattattgcagaaactggcgcggggcagcacggcgttgccacc
gcccttgcctgcgcgctgttggggcttaaatgtaaagtgtacatgggcgcaaaagatgtt
gagcgtcaatcccccaacgtgtttcgcatgaagctgatgggcgctgaagttattcctgtg
acctcaggctctgccaccttaaaagatgcctgtaatgaggccatgcgcgactggtcagca
agttatgataaggcccattatttattaggcacggccgcaggtccgcaccctttccctacc
atagtacgtgaatttcagcgcatgataggtgaagaaaccaagcagcaaatattagaaaaa
gaaggccgtttgcccgatgcggtcatcgcctgtgtgggcggcggctcaaacgccatcggc
atgttcgcggatttcattgatgagccgagtgttgagcttatcggcgtggaacccgctggt
aaaggtatagacaccccaatgcacggcgcgccgttaaagcatggtaaaaccgggatattc
ttcggcatgaaggcccccttaatgcaagacagagacggccagattgaagagtcatactct
gtctcagcaggtcttgatttcccgtcagtggggccacaacatgcgcaccttaacgccatc
ggccgcgcccgctatgagtcagccacagacgatgaagccttagccatgttccagcagctt
gcccgctgtgaaggcatcatcccagcgttggagtcggcccacgcgttagcgtatgcggta
aaacttgccaaaactgccaccaaggaaaccattctcgtggttaatttatcggggcgcggt
gacaaggacatcttcactgtgtctgacattttagcggccaaagaacaggagagcggcaat
gactaa

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