KEGG T00344: Sden

Shewanella denitrificans: Sden_3287

Entry

Sden_3287 CDS T00344

Definition

twin-arginine translocation pathway signal

Orthology

K01113

alkaline phosphatase D [EC:3.1.3.1]

Organism

sdn Shewanella denitrificans

Pathway

sdn00790	Folate biosynthesis
sdn01100	Metabolic pathways
sdn01120	Microbial metabolism in diverse environments
sdn02020	Two-component system

Module

sdn_M00126

Tetrahydrofolate biosynthesis, GTP => THF

Class

Metabolism; Metabolism of cofactors and vitamins; Folate biosynthesis [PATH:sdn00790]
Metabolism; Xenobiotics biodegradation and metabolism; Aminobenzoate degradation
Environmental Information Processing; Signal transduction; Two-component system [PATH:sdn02020]

SSDB

Motif

Pfam:

PhoD UCR_Fe-S_N Metallophos

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3912621..3914378)

AA seq 585 aa
MTHNVSRRDFLAMSAKGVGAAVISYGLMGCGSEEKKIPGEFLHGVASGDPTHKEVILWTR
VTPEYDGDVSVYWELATDDTFSSLVQTGSMLTNIGRDYTVKVDAIQLEAGKQYFYRFKCG
DNLSPVGKTRTLPEGAVTSVKLAVLSCANFPAGYFNVYELAAQRDDLDAVVHLGDYLYEY
ARGGYASENAASLGREVLPAHELISLTDYRSRYGQYHQDASLQKLHAKVPFITVWDDHEV
ANDAWREGAENHQAAEGDFDLRKQSALQAYFEWLPIRPWREGNHEDIYRSFSFGDLVDLH
MLDTRLVGRDKQLDYASYMDPNSGAFNDKAFKADVTWPYRTMLGQTQLEWLQGTLLQATG
KWQVLGQQVLMGQMSLPAAIAMQTLSIPEFAELGALAQLAGRAQAGDPSLTADELTYLQA
NQGKLTPEVLAQLQLPAIPYNLDAWDGYFYEREVILSTAKSANHNLVVLAGDTHNAWANE
LKDYKGNAIGVEFATSSVSSPGLEYYLNIPLEQIPATEAAIVGMVEHLKYANLKDRGYMM
LSFTPEEVRSDWFFVDSILSKDFNLASDRNYSAVTKIGVPSIAPV

NT seq 1758 nt +upstreamnt +downstreamnt
atgactcataatgtttcacgtcgtgactttttagccatgtcagccaaaggtgttggcgct
gcggttatttcttatggccttatgggctgtggtagcgaagaaaaaaaaattcctggtgaa
tttttgcatggtgtagccagtggtgatccgacccacaaagaagtgatcctctggactcgt
gtgacccctgaatatgatggagacgtctcggtttattgggagcttgccacagatgatact
ttcagtagtttggtgcaaacgggtagtatgctgactaatattggtcgcgactacaccgtc
aaagttgatgccattcagctggaagcaggcaagcaatatttctaccgtttcaaatgtggc
gataatttatcgccagtgggcaaaacccgcactttgccagaaggcgctgtgacttcagtt
aaattggcggtactgtcttgtgctaacttccccgccggctactttaacgtctatgaactg
gcggcgcagcgtgatgatttagatgccgtggtgcacttaggcgattacctctatgagtat
gccagagggggttacgccagtgagaatgccgcttctcttggtcgtgaagtgctacccgcc
catgagttaatatctttaactgattatcgcagtcgttatggtcaatatcatcaggatgcg
agtttgcaaaaactgcatgccaaagtgcctttcatcacagtgtgggacgatcatgaagtg
gccaatgatgcctggcgcgaaggggctgaaaatcatcaagctgcagaaggggattttgat
ctacgtaagcaatcagcactgcaagcctattttgaatggctgcccattcgaccatggcgt
gaaggcaatcatgaagatatctatcgaagcttcagtttcggtgatttagtcgacttacac
atgctagacacccgtcttgtggggcgtgataagcagctcgattacgctagctacatggac
cctaacagcggggcttttaacgataaagcctttaaagccgatgtgacctggccttaccgt
accatgctaggtcaaactcagctggagtggctgcagggcaccttgctacaggcaaccggt
aagtggcaggtattggggcaacaagtcttgatggggcagatgtcattgcctgctgcaatt
gccatgcaaaccctctctattccagagtttgctgagctaggggcattagcgcaacttgct
ggacgagctcaggcgggggatcctagcttgacagccgatgagctaacctacctgcaagcc
aatcagggcaagttgaccccagaggtattagcccagctacagctgccagctattccttat
aacttggatgcttgggacggttatttctacgagcgtgaagtgattttaagtaccgctaaa
tctgcgaaccacaacttagtggtattagccggtgatactcataatgcctgggccaacgaa
ctcaaggattataaaggcaatgccatcggggtggagtttgctaccagctcagtgtcatca
ccgggtcttgagtactacctcaatatcccccttgagcaaatccccgccacagaagcggca
atcgtgggcatggtagagcatttgaaatacgctaatctcaaagataggggttacatgatg
ctgagtttcacacctgaagaagtgcgcagcgattggttttttgtggatagcatactcagt
aaagactttaatcttgccagtgacagaaactacagcgccgtgactaaaattggcgtgccg
agcattgctccagtgtag

All links

Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SDN (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

Download RDF

DBGET integrated database retrieval system