KEGG T02857: SCD

Sulfuricella denitrificans: SCD_n00326

Entry

SCD_n00326        CDS       T02857

Name

(GenBank) ABC transporter

K06158

ATP-binding cassette, subfamily F, member 3

Organism

sdr Sulfuricella denitrificans

Brite

KEGG Orthology (KO) [BR:sdr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:sdr03012]
    SCD_n00326
Translation factors [BR:sdr03012]
Eukaryotic type
  Initiation factors
   Initiation associated factors
    SCD_n00326

SSDB

Motif

Pfam:

ABC_tran ABC_tran_Xtn AAA_21 SMC_N MMR_HSR1 RsgA_GTPase AAA_22 AAA_29 ABC_tran_CTD AAA_30 AAA_23 AAA AAA_18 MeaB AAA_15 AAA_24 NB-ARC AAA_28 TsaE Mg_chelatase AAA_16 FliD_N

Other DBs

NCBI-ProteinID:

BAN34175

UniProt:

S6A9I6

Position

complement(341995..343848)

AA seq 617 aa
MLNIQNLTYLQGGIPLFQQVNLQAYSSQRIGLVGKNGCGKSTLFRLIRGELKPDGGEISL
QSGKTLAFVEQEIANSTQPALEFVLDGDVQLRQLEKILASEQHDAAWFDAQHRYEALDGY
AAKARAAQLLNGLGFANDTLERPVTSFSGGWRMRLNLARALMHRADLLLLDEPTNHLDLE
AILWLEQYLARYPGSILLVSHDREFLNATVNRIAHVHDCVIDNYTGDYDDFERTRAEKIA
QQNQAFQTQQTKIAHLEDFVRRFSAKATKAKQAQSRVKALERLTRIAPAHITDGHFELEI
EAPERGPDLLLRAENMGFAYGDKNLFQNVDLALRAGARIALLGPNGAGKSTLIKLLVGEL
EPTAGKLEITPEMRIGYFAQHQLENLDSAATPLQHMERLAPKETTLALRTFLGRFGLAGN
SEDRPVESFSGGEKSRLALALLAWQKPHLLLLDEPTNHLDLDMRDALTLALEEYTGAVVL
VSHDRSLIRAVADELWLIADGEAKLFDGDLEDYKNWIETRRPRETAQVQQEKPRLEAAPR
PKKKALLSRQAKLEAELATVQAELSEINHQLADPATYAKCSGDEIGLLNTRHESLEVKAA
ELEESWLELEMALEEAV

NT seq 1854 nt +upstreamnt +downstreamnt
atgctaaatatacagaatttgacttaccttcaaggcggcataccgctatttcagcaggtg
aatttacaggcgtactccagccagcgcatcggtctggtcggcaagaacggctgcggcaaa
tccaccctgtttcgcctgatacgcggtgaactcaaacccgatggtggcgaaatctcgctg
caatccggcaagacactggcctttgtcgaacaggaaatcgccaactcgacgcaacccgcg
ctggaattcgtgcttgatggcgacgttcagctgcgccagttggaaaagatcctggcgagc
gaacaacatgacgccgcatggttcgacgcgcagcaccgctatgaagccctcgatggctat
gccgccaaagcccgtgcagcacagcttctgaatgggctgggtttcgccaacgacaccctg
gaacgtccggtaacgagcttctccggtggctggcggatgcgcctcaacctcgcccgcgca
ctgatgcatcgggctgatttgctgctgctcgacgagcccaccaaccatctggatctcgaa
gccatcctctggctcgaacagtacttggcacgctaccccggcagcattctgctggtctct
cacgacagggagtttctcaacgccaccgtcaaccgtatcgcccacgtacacgactgcgtt
atcgacaattataccggcgactacgacgacttcgaacgcacacgcgccgaaaaaatcgcc
cagcagaaccaggccttccagacgcagcagaccaagatcgcccacctcgaagatttcgtg
cgccgcttcagcgccaaggccaccaaggccaaacaggcgcaaagccgcgtcaaggcgcta
gaacggcttacgcgcattgccccggcgcatatcaccgacggccatttcgagctggagatc
gaggcgccggaacgcggcccagacctgctactgcgcgccgaaaacatgggcttcgcctat
ggcgacaagaacctgttccagaacgtcgatctggcactgcgtgccggcgcgcgcatcgcc
ctgctggggccgaacggcgccgggaaatccaccctgatcaagctgctggtgggtgaactc
gagcccactgcgggaaaactggaaatcaccccggagatgcgcatcggctacttcgcccag
caccaactggaaaatctggacagcgcggccacaccgctgcagcacatggagcgactggcg
cccaaggaaaccacgctggcactgcgtaccttccttggccgcttcggcctggccggaaac
agcgaggatagaccggtggaaagtttttccggcggcgaaaaaagccgcctggcgctggcc
ctgctggcctggcaaaaaccgcatctgctgctgctcgacgaacccactaaccatctcgat
ctggacatgcgcgacgccctcacgctggcgctggaggaatacaccggtgcggtggtgctg
gtctcccacgaccgcagcctgatccgcgccgtagccgacgagttgtggctgattgctgac
ggcgaagcgaagctttttgatggcgatctggaggactacaaaaactggatcgaaacccgg
cgaccacgtgagacggctcaggtgcagcaggaaaaacctcgcctggaagccgcgcccagg
ccgaagaagaaggccctgctatccagacaggccaagctcgaagccgagctggctactgtc
caggcagaactttccgaaatcaaccatcagctggccgacccggccacctatgctaaatgc
tctggggacgaaatcggccttctgaatacccggcatgagagcctggaagtcaaagctgcg
gaactggaggaaagctggctggaactggaaatggcgctggaagaagcggtctag

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (39)   

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