KEGG   Sulfuricella denitrificans: SCD_n02630Help
Entry
SCD_n02630        CDS       T02857                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sdr  Sulfuricella denitrificans
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:sdr00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    SCD_n02630
Enzymes [BR:sdr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     SCD_n02630
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SCD_n02630
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
2677070..2677885
Genome map
AA seq 271 aa AA seqDB search
MPELPEVETTRRGLEPHLVGQRILTAIVRHTGLRHPVPETLKQVLPGLTLRSIERRGKYL
LLDCGEGWLILHLGMSGSLRILPASTPPEKHDHFDLVVESGQCMRLRDPRRFGAILWTTA
PPEAHPLLAKLGIEPLTPAFDGNFLYRVSRGRRTPIKQFLMDGHIIVGVGNIYANEALFS
AGISPKTAAGRLGKARCTKLAALVKDILNLAIAAGGSTLRDFVNSAGNPGYFQQQYGVYG
RTGQPCLRCGMTVRQLRQGQRSTFYCPGCQK
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgccagaactgcccgaagtcgaaaccacccgtcgcggcctggaaccccaccttgtcggc
cagcgcattctgactgctatcgtccgccataccggcttgcgccatccggtgccggaaacg
ctgaaacaagtcctgcccggtttaaccctgcgcagcatcgaacgacgcggcaagtatctg
ctgctggattgtggcgagggctggctaatcctgcaccttggcatgtcgggcagtctgcgc
atcctgcccgcctctacgccgccagagaagcacgaccacttcgatctggtagtggaaagc
ggccagtgcatgcgactgcgcgatccacgccgcttcggggcaatactatggacgacggcg
ccaccggaagcccatccactcctggccaaactcggtatcgagccgctgacgcctgcgttc
gacggcaattttctctaccgggtatcgcgcggtcgccggaccccgatcaagcaatttctg
atggacggccacatcattgtcggtgtcggcaacatctacgcaaacgaagcgctgttttcc
gccggcatcagcccgaaaaccgcggccgggaggttgggcaaagcgcgctgcaccaagctg
gcggctttagtgaaggacatcctgaatctggccattgccgcgggcggcagcaccctgcgc
gatttcgtcaacagtgccggcaaccccggctattttcagcagcaatatggcgtctatggc
cgcaccggccagccctgcctgcgttgcggcatgacagtacgccagttacgccaggggcaa
cgctccaccttctactgccccggctgccagaaatag

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