KEGG   Streptomyces davawensis: BN159_1716Help
Entry
BN159_1716        CDS       T02518                                 

Definition
DNA polymerase LigD, ligase domain-containing protein
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
sdv  Streptomyces davawensis
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sdv00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    BN159_1716
   03420 Nucleotide excision repair
    BN159_1716
   03430 Mismatch repair
    BN159_1716
   03450 Non-homologous end-joining
    BN159_1716
Enzymes [BR:sdv01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BN159_1716
DNA repair and recombination proteins [BR:sdv03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BN159_1716
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1879117..1880181
Genome map
AA seq 354 aa AA seqDB search
MDLPVMPPVKPMLAKSVAKIPPGMQYEAKWDGFRAIVFRDGAEVELGSRTTKSLTRYFPE
LVEALKERVPERCVLDGEIVIAREWRLDFDALTERIHPAASRVRTLAERTPASFVAFDLL
ALADESLLDVELTDRRALLTRALARATPPVHVAPATTDVEVARQWFEQYEGAGLDGVIAK
PLTSRYLPDERAMFKIKHERTADVVVAGYRLHKSGPIVGSLLLGLYDDRGALQHVGVSAA
FAMKVRAQLIEELEPLRMDDTTGHPWAAWAEEAAHESARLPGAPSRWSGKKDLSWVPLRP
ERVCEVAYDHMENGARFRHTARFRRWRPDRTPESCTYAQLEEPVRYDLDEILGG
NT seq 1065 nt NT seq  +upstreamnt  +downstreamnt
atggaccttccggtgatgccgcccgtgaagccgatgctcgccaagtcggtggcgaagatc
ccgccgggcatgcagtacgaggccaagtgggacgggttccgggcgatcgtgttccgcgac
ggcgccgaggtcgagttgggcagccgtaccaccaagtcgttgaccaggtacttcccggag
ctggtggaggcgctcaaggagcgggtgcccgagcggtgcgtgctggacggggagatcgtg
atcgcccgggagtggcggctggacttcgacgcgctcaccgagcggatccacccggcggcc
tcccgcgtacggacgctggccgagcggaccccggcctccttcgtggccttcgatctgctg
gcgctggcggacgagtcgctgctggacgtggagctgaccgatcgcagggcgctgctgacc
agggcgctcgcgagggcgacgccaccggtgcacgtggcgcccgcgacaaccgacgtcgag
gtggcccggcagtggttcgagcagtacgagggcgccggtctggacggggtgatcgccaag
ccgctgacctcgcggtatctcccggacgagcgcgccatgttcaagatcaagcacgagcgc
acggccgatgtggtcgtggccggttaccggctgcacaagagcggaccgatcgtcggctcg
ctgctgctcggtctgtacgacgaccggggcgccctccagcacgtgggagtctccgccgcc
ttcgccatgaaggtgcgcgcccagctgatcgaggagctggagccgctgcgcatggacgac
accacgggacatccctgggcggcatgggccgaggaggcggcgcacgagtcggcccggctg
ccgggggcaccgagccgctggtccggaaagaaggacctgtcctgggtgccgctgaggccg
gagcgggtgtgcgaggtggcctacgaccacatggagaacggggcacgcttccggcacacc
gcccggttccgccgctggcgcccggaccggacgccggagagctgcacgtacgcccagctg
gaggagccggtccggtacgacctggacgagatcctcggcggctga

DBGET integrated database retrieval system