KEGG   Streptomyces davaonensis: BN159_6512
Entry
BN159_6512        CDS       T02518                                 
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
sdv  Streptomyces davaonensis
Pathway
sdv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sdv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BN159_6512 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdv03400]
    BN159_6512 (uvrB)
DNA repair and recombination proteins [BR:sdv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BN159_6512 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BN159_6512 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR AAA_16 AAA_22 UB2H AAA_5 AAA_19 Helicase_RecD DUF87 UvrD-helicase nSTAND3 AAA_7 AIG1
Other DBs
NCBI-ProteinID: CCK30891
UniProt: K4R3R4
Position
7310774..7312900
AA seq 708 aa
MRPVSSIERTVAPFEVVSPYQPSGDQPQAIADLARRIQAGEKDVVLLGATGTGKSATTAW
MIEQLQRPTLVMAPNKTLAAQLANEFRELLPNNAVEYFVSYYDYYQPEAYVPQSDTYIEK
DSSINEEVERLRHSATNSLLTRRDVVVVASVSCIYGLGTPQEYVDRMVPLKVGEEIDRDQ
LLRRFVDIQYTRNDAAFTRGTFRVRGDTIEIFPVYEELAVRIEMFGDEIEALSTLHPLTG
EIISDDEQLYVFPASHYVAGPERLERAVNDIEKELGERLAELEKQGKLLEAQRLRMRTTY
DIEMLRQIGSCSGVENYSMHFDGRLPGSPPNTLLDYFPDDFLLVIDESHVTVPQIGAMYE
GDASRKRTLVDHGFRLPSALDNRPLKWEEFQERIGQTVYLSATPGQYELSRSDGAVEQII
RPTGLVDPEVVVKPTEGQIDDLVHEIRTRTEKDERVLVTTLTKKMAEDLTDYFLELGIQV
RYLHSDVDTLRRVELLRELRAGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSGT
SLIQTIGRAARNVSGQVHMYADKITPAMEKAIDETNRRREKQVAYNRANGIDPQPLRKKI
NDIVAQIAREDVDTEQLLGSGYRKSKDGKGAKAPVPALGAKSAKSKGKAKEAVPTDRPAA
ELTEQIEEMTARMRAAAADLQFEIAARLRDEVSEMKKELRQMKEAGLA
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgcggcccgtttccagcatcgaacgcacggtggcgcccttcgaggtcgtcagcccctac
cagcccagcggcgaccagccgcaggccatcgccgacctcgcccggcgcatccaggcaggt
gagaaggacgtcgtcctgctcggcgcgaccggcaccggcaagtccgccaccaccgcgtgg
atgatcgagcagctccagcgccccaccctggtcatggcaccgaacaagaccctggccgcg
cagctggcgaacgagttccgggagctgttgccgaacaacgccgtcgagtacttcgtctcg
tactacgactactaccagcccgaggcctacgtcccgcagtcggacacctacatcgagaag
gactcctccatcaacgaggaggtcgagcggctgcgccactccgccaccaactcgctgctc
acccgccgcgacgtcgtcgtggtcgcctcggtgtcctgcatctacggcctcggcaccccg
caggagtacgtggaccgcatggtccccctcaaggtcggcgaggagatcgaccgcgaccag
ctgctgcgccgcttcgtggacatccagtacacgcgcaacgacgcggccttcacccggggc
accttccgggtgcgcggcgacaccatcgagatcttcccggtctacgaggagctggccgtc
cgcatcgagatgttcggcgacgagatcgaggcgctgtccacactgcaccccctcaccggc
gagatcatcagcgacgacgagcagctgtacgtcttcccggcctcccactacgtcgcgggc
cccgagcgcctggagcgcgcggtcaacgacatcgagaaggaactgggggagcgcctggcc
gagctggagaagcagggcaagctcctggaggcccagcggctgcgcatgcgcaccacctac
gacatcgagatgctccgccagatcggcagctgctccggcgtggagaactactcgatgcac
ttcgacggccgcctgcccggctccccgcccaacaccctgctcgactacttcccggacgac
ttcctgctcgtcatcgacgagtcgcatgtgaccgtgccgcagatcggcgccatgtacgag
ggcgacgcctcccgcaagcgcaccctcgtggaccacggcttccggctgccctccgcgctc
gacaaccgcccgctgaagtgggaggagttccaggagcgcatcggccagaccgtctacctc
tcggccaccccgggccagtacgagctctcgcgctccgacggcgcggtcgagcagatcatc
cgccccaccggcctggtcgacccggaggtcgtggtcaagcccaccgagggccagatcgac
gacctggtgcacgagatccggacgcgcaccgagaaggacgagcgggtcctggtcaccacc
ctcaccaagaagatggccgaggatctcaccgactacttcctggaactgggcatccaggtg
cgctacctgcacagcgacgtcgacaccctgcgccgggtggaactgctgcgcgaactgcgc
gccggtgagtacgacgtcctggtcggcatcaacctcctgcgcgagggcctcgacctgccc
gaggtctccctggtggccatcctcgacgcggacaaggagggcttcctgcgctcgggcacc
tccctgatccagaccatcggccgcgccgcgcgtaacgtctccggccaggtccacatgtac
gccgacaagatcaccccggcgatggagaaggccatcgacgagaccaaccgccgccgggag
aagcaggtcgcgtacaacagggccaacggcatcgacccgcagccgctgcgcaagaagatc
aacgacatcgtcgcgcagatcgcccgcgaggacgtcgacaccgagcaactgctcggctcc
ggctaccgcaagagcaaggacggcaagggcgccaaggctcccgtgcccgccctgggcgcg
aagtcggccaagagcaagggcaaggccaaggaggccgtgcccaccgaccggccggccgcc
gagctcaccgagcagatcgaggagatgaccgcgcggatgcgcgccgccgcggccgacctc
cagttcgagatcgcggcccggctgcgcgacgaggtctccgagatgaagaaggaactgcgc
cagatgaaggaggcgggcctggcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (25)   

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