KEGG   Streptomyces davawensis: BN159_7383Help
Entry
BN159_7383        CDS       T02518                                 

Gene name
lig
Definition
putative DNA ligase (EC:6.5.1.1)
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
sdv  Streptomyces davawensis
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sdv00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    BN159_7383 (lig)
   03420 Nucleotide excision repair
    BN159_7383 (lig)
   03430 Mismatch repair
    BN159_7383 (lig)
   03450 Non-homologous end-joining
    BN159_7383 (lig)
Enzymes [BR:sdv01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BN159_7383 (lig)
DNA repair and recombination proteins [BR:sdv03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BN159_7383 (lig)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(8260934..8262481)
Genome map
AA seq 515 aa AA seqDB search
MDCMLLTRIAQVSQEVAATSARSRKVALLAELFRDAEAADVPIVIPYLAGRLPQGRIGLG
WKVLSRPVTPADGPTLTVAEVDALLSTLAKVSGAGSQAERARLVGELMGSATKDEQRFLF
GLITGEVRQGALDAVAVEGLAEATGAPAADVRRAVMLAGSLQTVAEALLGDGPGALDRFR
LTVGRPVLPMLAHSAASVSEAVDKLGACAVEEKLDGIRVQLHRDGDTVRIYTRTLDDITD
RLPELTTAAMQLRGERFILDGEVIAFDEAGRPRSFQETAGRVGKRVDVATAAHAVPVSPV
FFDALSVDDRDLLDLPFAERHAELARLVPEPMRVRRTLVTGPQDARQAEDFLARTLERGH
EGVVVKALDAAYSAGRRGASWLKVKPVHTLDLVVLAAEWGHGRRTGKLSNLHLGARTADG
SFAMLGKTFKGMTDAMLTWQTKRLRELAVEESEYMVTVRPELVVEIAYDGLQRSTRYPAG
VTLRFARVVRYREDKRPEEADTVETLLAAHPEVKP
NT seq 1548 nt NT seq  +upstreamnt  +downstreamnt
atggattgcatgctgctgacccggatcgcccaggtgtcccaggaggtcgccgcgacctcg
gcccggtcccggaaggtcgctctgctggcggagttgttccgggacgccgaagccgcggat
gtgccgatcgtcatcccgtatctggcggggcggttgccgcagggtcggatcgggctcggg
tggaaggtgctcagccgtccggtcactcccgccgacggacccaccctgaccgtcgccgag
gtcgatgccttgctctccaccctcgccaaggtgtcgggcgccggatcccaggccgaacgg
gcccggctggtgggcgagttgatgggctcggcgacaaaggacgagcagcgctttctgttc
gggctgatcaccggtgaggtccggcaaggggcgctggacgccgtggccgtggagggcctg
gccgaggcgaccggcgccccggcggcggacgtacggcgggcggtgatgctggccggctcg
ctccagacggtggccgaggcgctgctcggcgacggtcccggcgcgctggatcggttccgg
ctcaccgtgggccggccggtcctgccgatgctggcgcacagcgctgcctcggtgtccgag
gcggtcgacaagctcggcgcctgcgcggtcgaggagaagctggacggcatccgggtccag
ctccaccgggacggcgacacggtacggatctacacccgcaccctcgacgacatcaccgac
cgactgcccgaactcaccaccgccgcaatgcagttgagaggcgagcggttcatcctggac
ggcgaggtcatcgccttcgacgaggcgggacggccccgttccttccaggagaccgcaggg
cgcgtcggcaaacgcgtggacgtggcgacggcggcgcacgccgtgcccgtctcccccgtc
ttcttcgacgcgctgtccgtcgacgaccgcgacctcctcgacctgcccttcgccgagcgc
cacgcggaactggcccgcctggtcccggagccgatgcgggtccggcgcaccctggtgacg
gggccccaggacgcccggcaggccgaggacttcctcgcccggaccctggagcgaggccac
gagggcgtggtcgtgaaggcgctggacgccgcctacagcgccgggcggcgcggcgcgtcc
tggctgaaggtcaagcccgtgcacaccctcgacctggtcgtcctggccgccgaatggggc
cacggacggcgcaccggcaagctctccaacctccacctcggcgcccgcaccgccgacggc
tccttcgcgatgctcggcaagaccttcaaggggatgaccgacgcgatgctgacctggcag
acgaagcgcctgagggagctggcggtcgaggagagcgagtacatggtgaccgtacgcccc
gaactcgtcgtcgagatcgcctacgacggcctccagcggtccacccgctacccggccgga
gtcaccctgcgcttcgcccgcgtggtccgctaccgggaggacaagcgccccgaggaggcc
gacacggtggagaccctgctcgccgcccaccccgaggtgaagccgtga

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