KEGG   Streptomyces davawensis: BN159_8336Help
Entry
BN159_8336        CDS       T02518                                 

Definition
ATP-dependent DNA ligase
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
sdv  Streptomyces davawensis
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sdv00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    BN159_8336
   03420 Nucleotide excision repair
    BN159_8336
   03430 Mismatch repair
    BN159_8336
   03450 Non-homologous end-joining
    BN159_8336
Enzymes [BR:sdv01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BN159_8336
DNA repair and recombination proteins [BR:sdv03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BN159_8336
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(9304511..9305467)
Genome map
AA seq 318 aa AA seqDB search
MLATPGTLPPAAQDARWAYETKQDGQRVVAYLDGDGGLVLRARSGEEVTAAYPELSPLSG
MLGATPAVLDGEVLALDEQGRADFQLLQSRMGLAHAPQRAARRAAEVPVHYALFDVMHLG
GRSLFRLPYLRRREQLEGLGLEGPHWSTPAALVGHGEQALRATREHGLEGLVCKRLDSVY
EPGVRSRNWIKIRNMRSADVVVGGWLPGKGRITGLPGAVLVGQRAGGRLRYVGGVGTGWS
AREREQLGVLLLAAETDVCPFDPVPAVPGARWVVPRLVGEVRFSTRTRAGLLRQPSWLRL
RPDLTPEESAADLPDDVD
NT seq 957 nt NT seq  +upstreamnt  +downstreamnt
atgctcgccacgcccggcaccctgccgcccgccgcgcaggacgcgcgctgggcctacgag
accaagcaggacggccagcgggtggtggcctacctcgacggggacggcggtctggtcctg
cgggcccgttccggggaggaggtcaccgccgcctaccccgagttgagccccctctccggc
atgctcggcgcgacgcccgcggtgctggacggggaggtgctcgccctcgacgaacagggc
cgcgcggacttccagttgctccagtcccggatggggctggcccacgcgccgcagcgggcg
gcacgccgggccgccgaggtgccggtgcactacgcgctgttcgacgtcatgcacctcggt
gggcggtcactgttccgactcccctacctgcggcggcgggagcaactggaagggctgggg
ttggagggcccgcactggtccacacccgcggcgctggtcggccacggtgagcaggccctg
cgggcgacccgtgagcacggtcttgaggggctggtgtgcaagcggctggactccgtgtac
gagccaggggtgcggtcgcggaactggatcaagatccgcaacatgcgcagcgcggacgtc
gtggtgggcggctggctgccggggaaggggcggatcacgggtctgcccggtgcggtgctg
gtgggccaacgggccggcgggcggctgcggtacgtcggcggggtgggcaccgggtggagc
gcgcgggagcgggagcagctcggcgtgctgctcctggccgccgagacggacgtatgcccc
ttcgatcccgtgcccgcggtgccgggtgcgcgctgggtcgtgccgcggctcgtcggggag
gtgcggttcagcacgcgtacccgggccgggctgctgcggcagccgtcgtggctgcggctg
cggccggacctgacgccggaggagtcggcggccgatctgccggacgacgtcgactga

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