KEGG S.dysenteriae: SDY

Shigella dysenteriae: SDY_0090

Entry

SDY_0090 CDS S.dysenteriae

Gene name araB

Definition ribulokinase (EC:2.7.1.16)

Orthology K00853 L-ribulokinase [EC:2.7.1.16]

Pathway sdy00040 Pentose and glucuronate interconversions
sdy01100 Metabolic pathways

Class Metabolism; Carbohydrate Metabolism; Pentose and glucuronate
interconversions [PATH:sdy00040]

SSDB

Motif Pfam: FGGY_C FGGY_N XPC-binding

Other DBs NCBI-GI: 82775469
NCBI-GeneID: 3799450
ShiBASE_China: SDY0090
UniProt: Q32K30

Position complement(88813..90513)

AA seq 566 aa
MAIAIGLDFGSDSVRALAVDCTTGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIES
MEAALKTVLAELSVEQRAAVVRIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWK
DHTAVEEAEEITRLCHALGNVDYSRYIGGIYSSEWFWAKILHVTRQDSAVAQSAASWIEL
CDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPASFFDELDPILNRHLPSPLFT
DTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVISTSTCDI
LIADKQSVGERAVKGICGQVDGSVVPGFIGLEAGQSAFGDIYAWFGRVLGWPLEQLAAHH
PELKEQINASQKQLLPALTEAWAKNPSLDHLPVVLDWFNGRRTPNANQRLKGVITDLNLA
TDAPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPL
QIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPRSEQAQRFEQLYRRYQ
QWAMSAEQHYLPTSAPAQAAQAVPTL

NT seq 1701 nt +upstreamnt +downstreamnt
atggcgattgcaattggcctcgattttggcagtgattctgtgcgagctttggcggtggac
tgcaccaccggtgaagaaatcgccaccagcgtagagtggtatccccgttggcaaaaaggg
caattttgtgatgccccgaataaccagttccgtcatcatccgcgtgactacattgagtca
atggaagcggcactgaaaaccgtgcttgcagaacttagcgtcgaacagcgcgcagctgtg
gtcaggattggcgttgacagtaccggctcgacgcccgcaccgattgatgccgacggtaac
gtgctggcgctgcgcccggagtttgccgaaaacccgaacgcgatgttcgtattgtggaaa
gaccacactgcggttgaagaagcggaagagattacccgtttgtgccacgcgctgggcaac
gttgactactcccgctacattggtggtatttattccagcgaatggttctgggcaaaaatc
ctgcatgtgactcgccaggacagcgccgtggcgcaatctgccgcatcgtggattgagctg
tgcgactgggtgccagctctgctttccggtaccacccgcccgcaggatattcgtcgcgga
cgttgcagcgccgggcataagtcgctatggcacgaaagctggggcggcctgccgccagcc
agtttctttgatgagctggacccgatcctcaatcgccatttgccttccccgctgttcact
gatacctggactgccgatattccggtgggcaccttatgcccggaatgggcgcagcgtctc
ggcctgcctgaaagcgtggtgatttccggcggcgcgtttgactgccatatgggcgcagtt
ggtgcaggcgcacagcctaacgcactggtaaaagttatcagtacgtccacctgcgacatt
ctgattgccgacaaacagagcgttggcgagcgggcagtgaaaggtatttgcggtcaggtt
gatggcagcgtggtgcctggatttatcggtctggaagcaggccaatcggcgtttggtgat
atctacgcctggttcggtcgcgtactcggctggccgctggaacagcttgccgcccatcat
ccggaactaaaagagcaaatcaacgccagccagaaacaactgcttccggcgctgaccgaa
gcatgggccaaaaatccgtctctggatcacctgccggtggtgctcgactggtttaacggc
cgccgcacaccgaacgctaaccaacgcctgaaaggggtgattaccgatcttaacctcgct
accgacgctccgctgctgttcggcggtttgattgctgccaccgcctttggcgcacgcgca
atcatggagtgctttaccgatcaggggatcgccgttaataacgtgatggcgctgggcggc
atcgcgcggaaaaaccaggtcattatgcaggcctgctgcgacgtgctgaatcgcccgctg
caaattgttgcctctgaccagtgctgtgcgctcggtgcggcgatttttgctgccgtcgcc
gcgaaagtgcacgcagacatcccctcagcccagcaaaaaatggccagtgcggtagagaaa
accctgcaaccgcgcagcgaacaggcacaacgctttgaacagctttatcgccgctatcag
caatgggcgatgagcgccgaacaacactatcttccaacttccgccccggcacaggctgcc
caggccgttccgactctataa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   SHIBASE_CHINA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)

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