KEGG   Shigella dysenteriae Sd197: SDY_0146
Entry
SDY_0146          CDS       T00306                                 
Symbol
lpdA
Name
(GenBank) lipoamide dehydrogenase (NADH)
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sdy  Shigella dysenteriae Sd197
Pathway
sdy00010  Glycolysis / Gluconeogenesis
sdy00020  Citrate cycle (TCA cycle)
sdy00260  Glycine, serine and threonine metabolism
sdy00280  Valine, leucine and isoleucine degradation
sdy00310  Lysine degradation
sdy00380  Tryptophan metabolism
sdy00620  Pyruvate metabolism
sdy00630  Glyoxylate and dicarboxylate metabolism
sdy00640  Propanoate metabolism
sdy00785  Lipoic acid metabolism
sdy01100  Metabolic pathways
sdy01110  Biosynthesis of secondary metabolites
sdy01120  Microbial metabolism in diverse environments
sdy01200  Carbon metabolism
sdy01210  2-Oxocarboxylic acid metabolism
sdy01240  Biosynthesis of cofactors
Module
sdy_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sdy_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sdy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sdy_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sdy00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SDY_0146 (lpdA)
   00020 Citrate cycle (TCA cycle)
    SDY_0146 (lpdA)
   00620 Pyruvate metabolism
    SDY_0146 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    SDY_0146 (lpdA)
   00640 Propanoate metabolism
    SDY_0146 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SDY_0146 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    SDY_0146 (lpdA)
   00310 Lysine degradation
    SDY_0146 (lpdA)
   00380 Tryptophan metabolism
    SDY_0146 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SDY_0146 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdy04147]
    SDY_0146 (lpdA)
Enzymes [BR:sdy01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SDY_0146 (lpdA)
Exosome [BR:sdy04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SDY_0146 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored GIDA Pyr_redox_3 FAD_binding_2 HI0933_like AlaDh_PNT_C Thi4 NAD_binding_8 FAD_binding_3 DAO Lycopene_cycl FMO-like
Other DBs
NCBI-ProteinID: ABB60380
ShiBASE_China: SDY0146
UniProt: Q32JX7
Position
148315..149739
AA seq 474 aa
MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVA
KVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFT
GANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLLV
MGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISKKFNLMLETKVTA
VEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKNLDAGKAGVEVDDRGFIRVDKQ
LRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWV
GLTEKEAKEKGISYETATFPWAASGRAIASDCADGMTKLIFDKESHRVIGGAIVGSNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNPKAKKK
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgagtactgaaatcaaaactcaggtcgtggtacttggggcaggccccgcaggttactcc
gctgccttccgttgcgctgatttaggtctggaaaccgtaatcgtagaacgttacaacacc
cttggcggtgtttgcctgaacgtcggctgtatcccttctaaagcactgctgcacgtagca
aaagttatcgaagaagccaaagcgctggctgaacacggtatcgtcttcggcgaaccgaaa
accgatattgacaagattcgtacctggaaagaaaaagtgatcaatcagctgaccggtggt
ctggctggtatggcgaaaggccgcaaagtcaaagtggtcaacggtctgggtaaatttacc
ggggctaacaccctggaagttgaaggtgagaacggtaaaaccgtgatcaacttcgacaac
gcgatcattgcagcgggttctcgcccgattcaactgccgtttattccgcatgaagatccg
cgtatctgggactccactgacgcgctggaactgaaagaagtaccagaacgcctgctggta
atgggtggcggtatcatcggtctggaaatgggcaccgtttaccacgcgctgggttcacag
attgacgtggttgaaatgttcgaccaggttatcccggcagctgacaaagacatcgttaaa
gtcttcaccaagcgtatcagcaagaaattcaacctgatgctggaaaccaaagttaccgcc
gttgaagcgaaagaagacggcatttatgtgacgatggaaggcaaaaaagcacccgctgaa
ccgcagcgttacgacgccgtgctggtagcgattggtcgtgtgccgaacggtaaaaacctc
gacgcaggcaaagctggcgtggaagttgacgaccgtggtttcatccgcgttgacaaacag
ctgcgtaccaacgtaccgcacatctttgctatcggcgatatcgtcggtcagccgatgctg
gcacacaaaggtgttcacgaaggtcacgttgccgctgaagttatcgccggtaagaaacac
tacttcgatccgaaagttatcccgtccatcgcctataccgaaccagaagttgcatgggta
ggtctgactgagaaagaagcgaaagagaaaggcatcagctatgaaaccgccaccttcccg
tgggctgcttctggtcgtgccatcgcttccgactgcgcagacggtatgaccaagctgatt
ttcgacaaagaatctcaccgtgtgatcggtggtgcgattgtcggtagcaacggcggcgag
ctgctgggtgaaatcggcctggcaatcgaaatgggttgtgacgctgaagacatcgcgctg
accatccatgcgcacccgactctgcacgagtctgtgggcctggcggcagaagtgttcgaa
ggtagcattaccgacctgccgaacccgaaagcgaagaagaagtaa

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