KEGG T00306: SDY

Shigella dysenteriae: SDY_0378

Entry

SDY_0378 CDS T00306

Gene name

lacZ

Definition

beta-D-galactosidase (EC:3.2.1.23)

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

sdy Shigella dysenteriae

Pathway

sdy00052	Galactose metabolism
sdy00511	Other glycan degradation
sdy00600	Sphingolipid metabolism
sdy01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:sdy00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:sdy00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:sdy00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_C Bgal_small_N Glyco_hydro_2_N Glyco_hydro_2

Other DBs

NCBI-GI:

NCBI-GeneID:

ShiBASE_China:

UniProt:

Position

complement(362065..364974)

AA seq 969 aa
MVSGNLSWFPAPEAVPESWLECDLPVADTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFV
PTENPTGYYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLS
AFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQIRDFHVATRFNDD
FSRAVLEAEVQMYGELRDELRVTVSLWQGETQVASGTAPFGGEIIHERGGYADRVTLGLN
VENPKLWSAEIPNIYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGV
NRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN
IETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRW
IKSVDPSRPVQYEGGGADTSATDIICPMYARVDEDQLFPAVPKWSIKKWLSLPGETRPLI
LCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGD
TPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGRTIEVTSEYLFRQSDNELLHW
TVALDGKPLASSEVPMNVAPQGKQVIELPELPRLESTGQLWLTVHVVQPNATAWSEAGHI
SAWQQWRLAANLSVTLPSAPHAIPQLTTSETDFCIELDNKRWQFNRQSGFLSQMWIGDEK
QLLTPLRDQFTRAPLDNDIGVSEATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAV
LITTAHTWQHQGKTLFISRKTYRIDGSGQMAITVDVEVASDTPHPARIGLTCQLAQVAER
VNWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGD
FQFNISRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRY
HYQLVWCQK

NT seq 2910 nt +upstreamnt +downstreamnt
atggtgagtggcaatttgtcttggtttccggcaccagaagcggttccggaaagctggctg
gagtgcgatcttcctgtcgccgatactgtcgtcgtcccctcaaactggcagatgcacggt
tacgacgcgcccatctacaccaacgtgacctatcccattacggtcaatccgccatttgtt
cccacagagaatccgacgggttattactcgctcacatttaatgttgatgaaagctggcta
caggaaggccagacgcgaattatttttgatggcgttaactcggcgtttcatctgtggtgc
aacgggcgctgggtcggttacggccaggacagtcgtttgccgtctgaatttgacctgagc
gcatttttacgcgccggagaaaaccgcctcgcggtgatggtgctgcgctggagtgacggc
agttatctggaagatcaggatatgtggcggatgagcggcattttccgtgacgtctcgttg
ctgcacaaaccgaccacacaaatccgcgatttccatgttgccactcgctttaatgatgat
ttcagccgcgcggtactggaggcagaagttcagatgtacggcgagctgcgcgatgagctg
cgggtgacggtttctttgtggcagggtgaaacgcaggtcgccagcggcaccgcgcctttc
ggcggtgaaattatccatgagcgtggcggttatgccgatcgcgtcacactaggtctgaac
gtcgaaaacccgaaactgtggagcgccgaaatcccgaatatctatcgtgcggtggttgaa
ctgcacaccgccgacggcacgctgattgaagcagaagcctgcgatgtcggtttccgcgag
gtgcggattgaaaatggtctgctgctgctgaacggcaagccgttgctgattcgcggcgtt
aaccgtcacgagcatcatcctctgcatggtcaggtcatggatgagcagacgatggtgcag
gatatcctgctgatgaagcagaataactttaacgccgtgcgctgttcgcattatccgaac
catccgctgtggtacacgctgtgcgaccgctacggcctgtatgtggtggatgaagccaac
attgaaacccacggcatggtgccaatgaatcgtctgaccgatgatccgcgctggctaccc
gcgatgagcgaacgcgtaacgcgaatggtgcagcgcgatcgtaatcacccgagtgtgatc
atctggtcgctgggaaatgagtcaggccacggcgctaatcacgacgcactctatcgctgg
atcaaatctgtcgatccttcccgcccggtacagtatgaaggcggcggagccgacacctcc
gcaaccgatattatttgcccgatgtacgcgcgcgtggatgaagaccagctcttcccggct
gtgccgaaatggtccatcaaaaaatggctttcgttgcctggagagacgcgcccgctgatc
ctttgcgaatacgcccacgcgatgggtaacagtcttggcggcttcgcgaaatactggcag
gcgtttcgtcagtacccccgtttacagggtggcttcgtttgggactgggtggatcagtcg
ctgattaaatatgatgaaaacggcaacccgtggtcggcttacggcggtgattttggcgat
acgccgaatgatcgccagttctgcatgaacggtctggtctttgccgaccgcacgccgcat
ccggcgctgacggaagcaaaacaccagcagcagtttttccagttccgtttatccgggcga
accatcgaagtgaccagcgaatacctgttccgtcagagcgataacgagctcctgcactgg
acggtggcactggatggcaagccgctggcaagcagtgaagtacctatgaatgtcgctcca
caaggtaaacaggtaattgaattgcctgaactaccgcgactggagagcaccgggcaactc
tggctaacggtacacgtagtgcaaccgaacgcgaccgcatggtcagaagccggacacatc
agcgcctggcagcagtggcgtctggcggcaaacctcagcgtgacactcccctccgcgccc
cacgccatcccgcaactgaccaccagcgaaacggatttttgcatcgagctggataataag
cgttggcaatttaaccgccagtcaggctttctttcacagatgtggattggcgatgaaaaa
caactgctgacgccgctgcgcgatcagttcacccgtgcaccgctggataacgacattggc
gtaagtgaagcgacccgcattgaccctaacgcctgggtcgaacgctggaaggcggcgggc
cattaccaggccgaagcagcgttgttgcagtgcacggcagatacacttgccgacgcggtg
ctgattacgaccgctcacacgtggcagcatcagggaaaaaccttatttatcagccggaaa
acctaccggattgatggaagtggtcaaatggcgattaccgttgatgttgaagtagcgagc
gatacaccgcatccggcacggattggcctgacctgccagctggcgcaggttgcagagcgg
gtaaactggctcggattagggccgcaagaaaactatcccgaccgccttactgcggcctgt
tttgaccgctgggatctgccattgtcagacatgtataccccgtacgtcttcccgagcgaa
aacggtctgcgctgtgggacgcgcgaattgaattatggcccacaccagtggcgcggcgac
ttccagttcaatatcagtcgctacagccaacaacaactgatggaaaccagccatcgccat
ctgctgcacgcggaagaaggcacatggctgaatatcgacggtttccatatggggattggt
ggcgacgactcctggagcccgtcagtgtcggcggaattccagctgagcgccggtcgctac
cattaccagttggtctggtgtcaaaaataa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   SHIBASE_CHINA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (33)   

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