KEGG T00306: SDY

Shigella dysenteriae: SDY_0664

Entry

SDY_0664 CDS T00306

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

sdy Shigella dysenteriae

Pathway

sdy00020	Citrate cycle (TCA cycle)
sdy00310	Lysine degradation
sdy00380	Tryptophan metabolism
sdy01100	Metabolic pathways
sdy01110	Biosynthesis of secondary metabolites
sdy01120	Microbial metabolism in diverse environments

Module

sdy_M00009	Citrate cycle (TCA cycle, Krebs cycle)
sdy_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:sdy00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:sdy00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:sdy00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

ShiBASE_China:

UniProt:

Position

626231..629032

AA seq 933 aa
MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHS
QTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKV
ADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEALKQTYCGPIGAEYMHITSTEE
KRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLK
EMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMG
FSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAV
TGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIF
HVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKH
PTPCKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLNHE
WDEEYPNKVEMKRLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLA
YATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLS
EEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPH
GYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKS
LLRHPLAVSSLEELANGTFLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDV
AIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLR
YAGRPASASPAVGYMSVHQKQQQDLVNDALNVE

NT seq 2802 nt +upstreamnt +downstreamnt
atgcagaacagcgctttgaaagcctggttggactcttcttacctctctggcgcaaaccag
agctggatagaacagctctatgaagacttcttaaccgatcctgactcggttgacgctaac
tggcgttcgacgttccagcagttacctggtacgggagtcaaaccggatcaattccactct
caaacgcgtgaatatttccgccgcctggcgaaagacgcttcacgttactcttcaacgatc
tccgaccctgacaccaatgtgaagcaggttaaagtcctgcagctcattaacgcataccgc
ttccgtggtcaccagcatgcgaatctcgatccgctgggactgtggcagcaagataaagtg
gccgatctggatccgtctttccacgatctgaccgaagcagacttccaggagaccttcaac
gtcggttcatttgccagcggcaaagaaaccatgaaactcggcgaactgctggaagccctc
aagcaaacctactgcggcccgattggtgccgagtatatgcacattaccagcaccgaagaa
aaacgctggatccaacagcgtatcgagtctggtcgcgcgactttcaatagcgaagagaaa
aaacgcttcttaagcgaactgaccgccgctgaaggccttgaacgttacctcggtgcaaaa
ttccctggtgcaaaacgcttctcgctggaaggcggtgacgcgttaatcccgatgcttaaa
gagatgatccgccacgctggcaacagcggcacccgggaagtggttctcgggatggcgcac
cgtggtcgtctgaacgtgttggtgaatgtgctgggtaaaaaaccgcaagacttgttcgac
gagtttgccggtaagcataaagaacacctcggcacgggtgacgtgaaataccacatgggc
ttctcgtctgacttccagaccgatggcggcctggtgcacctggcgctggcgtttaacccg
tctcaccttgagattgtcagcccggtagttatcggctctgttcgtgcccgtctggacaga
cttgatgagccgagcagcaacaaagtgctgccaatcaccatccacggtgacgccgcagtg
accgggcagggcgtggttcaggaaaccctgaacatgtcgaaagcgcgtggttatgaagtt
ggcggtacggtacgtatcgttatcaacaaccaggttggtttcaccacctctaatccgctg
gatgcccgttctacaccgtactgtactgatatcggtaagatggttcaggcaccgattttc
cacgttaacgcggatgatccggaagccgttgcctttgtgacccgtctggcgctcgatttc
cgtaacacctttaaacgtgatgtcttcatcgacctggtgtgctaccgccgtcacggccac
aacgaagccgacgagccgagcgcaacccagccgctgatgtatcagaaaatcaaaaaacat
ccgacgccgtgcaaaatctatgctgacaagctggagcaggaaaaagtggcgacgctggaa
gatgccaccgagatggttaacctgtaccgcgatgcgctggatgctggcgattgcgtagtg
gcagagtggcgtccgatgaacatgcactctttcacctggtcgccgtatctcaaccacgaa
tgggacgaagagtacccgaacaaagttgagatgaagcgcctgcaggaactggctaaacgc
atcagcacggtgccggaagcggttgaaatgcagtctcgcgttgccaagatttatggcgat
cgccaggcaatggcagccggtgagaaactgttcgactggggcggcgcggaaaacctcgct
tacgccacgctggttgatgaaggcattccggttcgcctgtcgggtgaagactccggtcgc
ggtacgttcttccaccgccacgcggtgatccacaaccagtctaacggttccacttacacg
ccgctgcaacatatccataacggccagggcgcattccgtgtctgggactccgtactgtct
gaagaagcagtgctggcgtttgaatacggttatgccaccgcagaaccacgcactctgact
atctgggaagcacaatttggtgacttcgccaacggtgcgcaggtggttatcgaccagttc
atctcctctggcgaacagaaatggggccggatgtgtggtctggtgatgttgctgccgcac
ggttatgaagggcaggggccggagcactcctccgcgcgtctggaacgttatctgcaactt
tgtgctgagcaaaacatgcaggtgtgcgtaccgtctaccccggcacaggtttaccacatg
ctgcgtcgtcaggcgctgcgcgggatgcgtcgtccgctggtcgtgatgtcgccgaaatcc
ctgctgcgtcatccgctggcggtttccagcctcgaagaactggcgaacggcaccttcctg
ccagccatcggtgaaatcgacgagcttgatccgaagggcgtgaagcgcgtagtgatgtgt
tctggtaaggtttattacgacctgctggaacagcgtcgtaagaacaatcaacacgatgtc
gccattgtgcgtatcgagcaactctacccgttcccgcataaagcgatgcaggaagtgttg
cagcagtttgctcacgtcaaggattttgtctggtgccaggaagagccgctcaaccagggc
gcatggtactgcagccagcatcatttccgtgaagtgattccgtttggggcttctctgcgt
tatgcaggccgcccggcctccgcctctccggcggtagggtatatgtccgttcaccagaaa
cagcaacaagatctggttaatgacgcgctgaacgtcgaataa

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   SHIBASE_CHINA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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