KEGG S.dysenteriae: SDY

Shigella dysenteriae: SDY_1004

Entry

SDY_1004 CDS S.dysenteriae

Gene name ycdW

Definition putative dehydrogenase

Orthology K12972 gyoxylate/hydroxypyruvate reductase A [EC:1.1.1.79 1.1.1.81]

Pathway sdy00260 Glycine, serine and threonine metabolism
sdy00620 Pyruvate metabolism
sdy00630 Glyoxylate and dicarboxylate metabolism
sdy01100 Metabolic pathways

Class Metabolism; Carbohydrate Metabolism; Pyruvate metabolism
[PATH:sdy00620]
Metabolism; Carbohydrate Metabolism; Glyoxylate and dicarboxylate
metabolism [PATH:sdy00630]
Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:sdy00260]

SSDB

Motif Pfam: 2-Hacid_dh_C NAD_binding_2 DUF551 NAD_Gly3P_dh_N PilN
PROSITE: D_2_HYDROXYACID_DH_3

Other DBs NCBI-GI: 82776312
NCBI-GeneID: 3797139
ShiBASE_China: SDY1004
UniProt: Q32HN5

Position complement(950981..951958)

AA seq 325 aa
MRINFTQRFSGVSMDIIFYHPTFDTQWWIKALRKAIPQARVRAWKSGDNDSADYALVWHP
PVEMLAGRDLKAVFALGAGVDSILSKLQAHPEMLNPYVPLFRLEDTGMGEQMQEYAVSQV
LHWFRRFDDYRIQQNSSHWQPLPEYYREDFTIGILGAGVLGSKVAQSLQTWRFPLRCWSR
TRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLAR
GVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAITRPAEAVE
YISRTIAQLEKGERVCGQVDRARGY

NT seq 978 nt +upstreamnt +downstreamnt
gtgcgaataaatttcacacaacgcttttcgggagtcagtatggatatcatcttttatcac
ccaacgttcgatacccaatggtggattaaggcactgcgcaaagctattcctcaggcaaga
gtcagagcatggaaaagcggagataatgactctgctgattatgctttagtctggcatcct
cctgttgaaatgctggcagggcgcgatcttaaagcggtgttcgcactcggggccggtgtt
gattctattttgagcaagctacaggcacaccctgaaatgctgaacccttatgttccactt
tttcgcctggaagataccggtatgggcgagcaaatgcaggaatatgctgtcagtcaggtg
ctgcattggtttcgacgttttgacgattatcgcatccagcaaaatagttcgcattggcaa
ccgctgcctgaatattatcgggaagattttaccatcggcattttgggcgcaggcgtgctg
ggcagtaaagttgctcagagtctgcaaacctggcgctttccgctgcgttgctggagtcga
acccgtaaatcgtggcctggcgtgcaaagctttgccggacgggaagaactgtctgcattt
ctgagccaatgtcgggtattgattaatttgttaccgaatacccctgaaaccgtcggcatt
attaatcaacaattactcgaaaaattaccggatggcgcgtatctcctcaacctggcgcgt
ggtgttcatgttgtggaagatgacctgctcgcggcgctggatagcgggaaagttaaaggc
gcaatgctggatgtttttaatcgtgaacccttaccgcctgaaagtccgctctggcaacat
ccacgcgtgacgataacaccacatgtcgccgcgattacccgtcccgctgaagctgtggag
tacatttctcgcactattgcccagctcgaaaaaggggagagggtctgcggtcaagtcgac
cgcgcacgcggctactaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   SHIBASE_CHINA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (5)   
   PROSITE (1)   
All databases (22)

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