KEGG   Shigella dysenteriae Sd197: SDY_1709
Entry
SDY_1709          CDS       T00306                                 
Symbol
fadD
Name
(GenBank) acyl-CoA synthetase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
sdy  Shigella dysenteriae Sd197
Pathway
sdy00061  Fatty acid biosynthesis
sdy00071  Fatty acid degradation
sdy01100  Metabolic pathways
sdy01212  Fatty acid metabolism
sdy02024  Quorum sensing
Module
sdy_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:sdy00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    SDY_1709 (fadD)
   00071 Fatty acid degradation
    SDY_1709 (fadD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SDY_1709 (fadD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:sdy01004]
    SDY_1709 (fadD)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdy04147]
    SDY_1709 (fadD)
Enzymes [BR:sdy01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     SDY_1709 (fadD)
Lipid biosynthesis proteins [BR:sdy01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   SDY_1709 (fadD)
Exosome [BR:sdy04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   SDY_1709 (fadD)
  Exosomal proteins of breast cancer cells
   SDY_1709 (fadD)
SSDB
Motif
Pfam: AMP-binding AMP-binding_C Pept_S41_N AMP-binding_C_2
Other DBs
NCBI-ProteinID: ABB61829
ShiBASE_China: SDY1709
UniProt: Q32FS6
Position
complement(1561171..1562856)
AA seq 561 aa
MKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVNMGEVMTFRKLEERSRA
FAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDS
GASAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAKGTVVNFVVKYIKRLVPKYHL
PDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNA
TYGPLLHPGKELVVTALPLYHIFALTINCLLFIELGGQNLLITNPRDIPGLVKELAKYPF
TAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLLEGYGLT
ECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCVKGPQVMLGYWQ
RPDATDEIIKNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGV
QEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKSN
VGKILRRELRDEARGKVDNKA
NT seq 1686 nt   +upstreamnt  +downstreamnt
ttgaagaaggtttggcttaaccgttatcccgcggacgttccgacggagatcaaccctgac
cgttatcaatctctggtagatatgtttgagcagtcggtcgcgcgctacgccgatcagcct
gcgtttgtgaatatgggggaggtgatgaccttccgcaagctggaagaacgcagtcgcgcg
tttgccgcttatttgcaacaagggttggggctgaagaaaggcgatcgcgttgcgttgatg
atgcctaatttattgcaatatccggtggcgctgtttggcattttgcgtgccgggatgatc
gtcgtaaacgttaacccgttgtataccccgcgtgagcttgagcatcagcttaacgatagc
ggcgcatcggcgattgttatcgtgtctaactttgctcacacactggaaaaagtggttgat
aaaaccgccgttcagcacgtaattctgacccgtatgggcgatcagctatctacggcaaaa
ggcacggtagtcaatttcgttgttaaatacatcaagcgtttggtgccgaaataccatctg
ccagatgccatttcatttcgtagcgcactgcataacggctaccggatgcagtacgtcaaa
cccgaactggtgccggaagatttagccttcctgcaatacaccggcggcaccacaggtgtg
gcgaaaggcgcgatgctgactcaccgcaatatgctggcgaacctggaacaggtcaacgcc
acctatgggccgttgctgcatccaggtaaagaactggtagtaacggcactgccgctgtat
cacatttttgccctgaccattaactgcctgctgtttatcgaactgggggggcagaacctg
cttatcactaacccgcgtgatattccagggttggtaaaagagttagcgaaatatccgttt
accgctatcactggcgttaacaccttgttcaatgcgttgctgaacaataaagagttccag
cagctggatttctccagtctgcatctttccgcaggcggtgggatgccagtgcagcaagtg
gtggcagagcgttgggtgaaactgacaggacagtatctgctggaaggctatggccttacc
gagtgtgcgccgctggtcagcgttaacccatatgatattgattatcatagtggtagcatc
ggtttgccggtgccgtcgacggaagccaaactggtggatgatgatgataatgaagtacca
ccgggtcaaccgggtgagctttgtgtcaaaggaccgcaggtgatgctgggttactggcag
cgtccggatgctacagatgagatcatcaaaaatggctggttacacaccggcgacatcgcg
gtgatggatgaagaagggttcctgcgcattgtcgatcgtaaaaaagacatgattctggtt
tccggttttaacgtctatcccaacgagattgaagatgtcgtcatgcagcatcctggcgta
caggaagtcgcggctgttggcgtaccttccggctccagtggtgaagcggtgaaaatcttc
gtagtgaaaaaagatccatcgcttaccgaagagtcactggtgaccttttgccgccgtcag
ctcacgggctacaaagtaccgaagctggtggagtttcgtgatgagttaccgaaatctaac
gttggaaaaattttgcgacgagaattacgtgacgaagcgcgcggcaaagtggacaataaa
gcctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   SHIBASE_CHINA (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

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