KEGG   Shigella dysenteriae Sd197: SDY_3379
Entry
SDY_3379          CDS       T00306                                 
Symbol
yrbI
Name
(GenBank) conserved hypothetical protein
  KO
K03270  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
Organism
sdy  Shigella dysenteriae Sd197
Pathway
sdy00540  Lipopolysaccharide biosynthesis
sdy01100  Metabolic pathways
sdy01250  Biosynthesis of nucleotide sugars
Module
sdy_M00063  CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:sdy00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    SDY_3379 (yrbI)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:sdy01005]
    SDY_3379 (yrbI)
Enzymes [BR:sdy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.45  3-deoxy-manno-octulosonate-8-phosphatase
     SDY_3379 (yrbI)
Lipopolysaccharide biosynthesis proteins [BR:sdy01005]
 Lipid A
  SDY_3379 (yrbI)
SSDB
Motif
Pfam: Hydrolase_3 Hydrolase HAD_2 S6PP
Other DBs
NCBI-ProteinID: ABB63370
ShiBASE_China: SDY3379
UniProt: Q32BD5
Position
3133522..3134088
AA seq 188 aa
MSKAGASLATCYGPVSADVIAKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGY
GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNKLIAFSDLLEKLAIAPENV
AYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCDLLLLAQGKL
DEAKGQSI
NT seq 567 nt   +upstreamnt  +downstreamnt
atgagcaaagcaggtgcgtcgcttgcgacctgttacggccctgtcagcgccgacgttata
gcaaaagcagagaacattcgtctgctaatcctcgacgttgatggcgtactgtcagatggc
ctgatttatatgggcaataacggcgaagagctgaaagcgttcaatgttcgtgacggttat
ggcattcgttgtgcgctcacctctgatattgaagtcgctatcattaccgggcgaaaggct
aaactggtagaagatcgttgtgccacattggggatcactcacttgtatcaggggcagtca
aacaaactgatcgcctttagcgatctgctggaaaaattggcgattgccccggaaaatgtg
gcttatgtcggcgatgatctcatcgactggccggtaatggaaaaagtgggtttaagcgtc
gccgtggccgatgcgcatccactgttgatcccgcgcgccgattacgtgacgcgcattgct
ggcggtcgtggcgcagtgcgagaagtttgcgacttattactcctggcgcagggcaaactg
gatgaagccaaagggcaatcgatatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   SHIBASE_CHINA (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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