KEGG T00306: SDY

Shigella dysenteriae: SDY_3412

Entry

SDY_3412 CDS T00306

Gene name

mdh

Definition

malate dehydrogenase (EC:1.1.1.37)

Orthology

K00024

malate dehydrogenase [EC:1.1.1.37]

Organism

sdy Shigella dysenteriae

Pathway

sdy00020	Citrate cycle (TCA cycle)
sdy00620	Pyruvate metabolism
sdy00630	Glyoxylate and dicarboxylate metabolism
sdy00680	Methane metabolism
sdy01100	Metabolic pathways
sdy01110	Biosynthesis of secondary metabolites
sdy01120	Microbial metabolism in diverse environments

Module

sdy_M00009	Citrate cycle (TCA cycle, Krebs cycle)
sdy_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sdy_M00168	CAM (Crassulacean acid metabolism), dark

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:sdy00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:sdy00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:sdy00630]
Metabolism; Energy metabolism; Methane metabolism [PATH:sdy00680]

SSDB

Motif

Pfam:

Ldh_1_N Ldh_1_C NAD_binding_10 Semialdhyde_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

ShiBASE_China:

UniProt:

Position

complement(3167349..3168287)

AA seq 312 aa
MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG
EDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP
VNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGV
TILPLLSQVLGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVR
ALQGEQGVVECAYVEGDGQYARFFSQPLLLGKSGVEERKSIGTLSAFEQNALEGMLDTLK
KDIALGEEFVNK

NT seq 939 nt +upstreamnt +downstreamnt
atgaaagtcgcagtcctcggcgctgctggcggtattggccaggcgcttgcactactgtta
aaaacccaactgccttcaggttcagaactctctctgtatgatatcgctccagtgactccc
ggtgtggctgtcgatctgagccatatccctactgctgtgaaaatcaaaggtttttctggt
gaagatgcgactccggcgctggaaggcgcagatgtcgttcttatctctgcaggtgtagcg
cgtaaaccgggtatggatcgttccgacctgtttaacgttaacgccggcatcgtgaaaaac
ctggtacagcaagttgcgaaaacctgcccgaaagcgtgcattggtattattactaacccg
gttaacaccacagttgcgattgctgctgaagtgctgaaaaaagccggtgtttatgacaaa
aacaaactgttcggcgttaccacgctggatatcattcgttccaacacctttgttgcggaa
ctgaaaggcaaacagcctggcgaagttgaagtgccggttattggcggtcactctggtgtt
accattctgccgctgctgtcacaggttcttggcgttagttttaccgagcaggaagtggct
gatctgaccaaacgcatccagaacgcgggtactgaagtggttgaagcgaaagccggtggc
gggtctgcaaccctgtctatgggccaggcagctgcacgttttggtctgtctctggttcgt
gcactgcagggcgaacaaggcgttgtcgaatgtgcctacgttgaaggcgacggtcagtac
gcccgtttcttctctcaaccgctgctgctgggtaaaagcggcgtggaagagcgtaaatct
atcggtaccctgagcgcatttgaacagaacgcgctggaaggtatgctggatacgctgaag
aaagatatcgccctgggcgaagagtttgttaataagtaa

All links

Pathway (10)   
   KEGG PATHWAY (7)   
   KEGG MODULE (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   SHIBASE_CHINA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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